| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0228 |
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| Symbol | |
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| ID | 5592203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 246131 |
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| End bp | 246874 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640919415 |
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| Product | type VI secretion-associated protein |
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| Protein accession | YP_001457002 |
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| Protein GI | 157159684 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03360] type VI secretion-associated protein, VC_A0118 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 91 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGT TGCGCGTTTT CCGGCAGACA GGATGGTTTA TCGCGGGCCT GATGACGGGC
TTACCCGCCA CTGCCGCGCC CGCAGAAGCA TCGTCAATGG CCGGTGTGGC GGTCGCCGTC
GCCACCACGA CCCCGCCGGA TGCGACAGCC ACGTTACAGG CCATGCAGTC CTGTCGGCGG
GAGTCCGCGG CGCTGGAGCG GCTTGACTGC TATGACCGCC TGCTGGCACC GCTGTCCCCG
TCAGGGTTTG ACGGGGCGCT GGTCAAAGCC GGTTTTGTGG GCGAGGCCTG GACCCGCGCC
ACAGAGCAGG AAAAACGCCG CGAGGGCAAC ACCACAGAAC TGCTGGTGAC GCAGGTGCCG
GGGGAGCGCC CGACGGTGGT GATAACCACC CCGGCTATCG GTCATGTTCC GCCACGCCCG
GTGCTGATGT TCAGTTGCGT GGACAATATC ACCCGGATGC AGGTGGCGCT GATGCACCCT
CTGGATGTCC ATGATATCGC CGTCACTCTG AATGCCGACA ACCGGGCATT GCGCAGCCAC
TGGTTTGTGC GCGAGAACGG CACCCTGCTG GAGTCCAGCC GGGGGTTATC CGGGATTGAT
GAAATTAAGC AACTGTTCGG CGCAAAAACG CTGACGGTGG ATACCGGCGC AGACAATGCC
GCCGGAAAGC TGACCTTTAA CATTGACGGG CTGGCAAGGG CGATTGCTCC CCTGCGCGAT
GCCTGCCACT GGGCGGGAGA ATAA
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| Protein sequence | MSRLRVFRQT GWFIAGLMTG LPATAAPAEA SSMAGVAVAV ATTTPPDATA TLQAMQSCRR
ESAALERLDC YDRLLAPLSP SGFDGALVKA GFVGEAWTRA TEQEKRREGN TTELLVTQVP
GERPTVVITT PAIGHVPPRP VLMFSCVDNI TRMQVALMHP LDVHDIAVTL NADNRALRSH
WFVRENGTLL ESSRGLSGID EIKQLFGAKT LTVDTGADNA AGKLTFNIDG LARAIAPLRD
ACHWAGE
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