Gene EcHS_A0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0152 
SymbolmrcB 
ID5595317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp163778 
End bp166312 
Gene Length2535 bp 
Protein Length844 aa 
Translation table11 
GC content55% 
IMG OID640919338 
Productpenicillin-binding protein 1b 
Protein accessionYP_001456933 
Protein GI157159615 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02071] penicillin-binding protein 1B 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.94433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGA ATGACCGCGA GCCAATTGGA CGCAAAGGGA AACCGACGCG TCCGGTCAAA 
CAAAAGGTAA GCCGTCGTCG TTACGAAGAT GACGATGATT ACGACGATTA TGATGACTAT
GAGGATGAAG AACCGATGCC GCGCAAAGGT AAGGGCAAAG GCAAAGGGCG TAAGCCTCGT
GGCAAACGCG GCTGGCTATG GCTACTGCTA AAACTGGCTA TCGTTTTTGC CGTGCTGATC
GCCATTTACG GCGTTTATCT CGATCAAAAA ATTCGTAGCC GTATTGATGG CAAGGTCTGG
CAACTGCCTG CGGCAGTTTA TGGCCGAATG GTCAATCTTG AGCCAGACAT GACCATCAGC
AAGAACGAGA TGGTGAAGCT GCTGGAGGCG ACCCAGTATC GTCAGGTGTC GAAAATGACC
CGTCCTGGCG AATTTACCGT GCAGGCTAAC AGCATTGAGA TGATCCGCCG TCCGTTTGAT
TTCCCGGACA GCAAAGAAGG GCAGGTGCGT GCGCGTTTGA CCTTTGATGG CGATCATCTG
GCGACCATCG TCAATATGGA GAACAACCGT CAGTTCGGTT TCTTCCGTCT TGATCCGCGT
CTGATCACCA TGATCTCCTC GCCAAACGGT GAGCAGCGTT TGTTTGTGCC GCGCAGTGGT
TTCCCTGATT TGCTGGTGGA TACTTTGCTG GCGACAGAAG ACCGCCATTT CTACGAGCAT
GATGGAATCA GTCTCTACTC CATCGGACGT GCGGTGCTGG CAAACCTGAC CGCCGGACGC
ACGGTGCAGG GGGCGAGTAC ACTGACGCAA CAGCTGGTGA AAAACCTGTT CCTCTCCAGC
GAGCGCTCTT ACTGGCGTAA AGCGAACGAA GCTTACATGG CGCTGATCAT GGACGCGCGT
TACAGCAAAG ACCGTATTCT TGAGCTGTAT ATGAACGAGG TGTATCTCGG TCAGAGCGGC
GACAACGAAA TCCGCGGCTT CCCGCTGGCG AGCTTGTATT ACTTTGGTCG TCCGGTAGAA
GAATTGAGCC TCGATCAGCA GGCGCTGTTA GTCGGTATGG TGAAAGGAGC GTCCATCTAC
AACCCGTGGC GTAACCCGAA ACTGGCGCTG GAGCGACGTA ATCTGGTACT GCGTCTGCTG
CAACAGCAAC AGATTATTGA TCAAGAACTC TATGACATGT TGAGTGCACG TCCGCTGGGG
GTTCAGCCGC GCGGTGGGGT AATCTCTCCA CAGCCAGCCT TTATGCAACT GGTGCGTCAG
GAGCTGCAGG CAAAACTGGG CGATAAGGTA AAAGATCTCT CCGGCGTGAA GATCTTCACT
ACCTTTGACT CGGTGGCCCA GGACGCGGCA GAAAAAGCCG CCGTGGAAGG CATTCCGGCA
CTGAAGAAAC AGCGTAAGTT GAGCGATCTT GAAACTGCGA TTGTGGTCGT CGACCGCTTT
AGTGGTGAAG TTCGTGCGAT GGTCGGTGGT TCTGAGCCGC AGTTTGCGGG CTACAACCGT
GCGATGCAGG CGCGTCGTTC GATTGGTTCC CTTGCAAAAC CAGCGACTTA CCTGACGGCT
TTAAGCCAGC CGAAAATCTA TCGTCTGAAT ACGTGGATTG CGGATGCGCC AATCGCGCTG
CGTCAGCCGA ATGGCCAGGT CTGGTCACCG CAGAACGATG ATCGTCGTTA TAGCGAAAGT
GGCAGAGTGA TGCTGGTGGA TGCGTTGACC CGTTCGATGA ACGTGCCGAC GGTAAATCTG
GGGATGGCGC TGGGGCTGCC TGCGGTTACG GAGACCTGGA TCAAACTGGG CGTGCCGAAA
GATCAGTTGC ATCCGGTTCC GGCAATGCTG CTGGGGGCGT TGAACTTAAC GCCAATCGAA
GTGGCGCAGG CATTCCAGAC CATCGCCAGC GGTGGTAACC GTGCACCGCT TTCTGCACTG
CGTTCGGTAA TCGCGGAAGA TGGCAAGGTG CTGTATCAGA GCTTCCCGCA GGCAGAACGC
GCTGTTCCGG CGCAGGCGGC GTATCTGACA CTATGGACCA TGCAGCAGGT GGTACAACGT
GGTACGGGTC GTCAGCTTGG GGCGAAATAC CCGAACCTGC ATCTGGCAGG GAAAACAGGG
ACTACCAACA ATAACGTAGA TACCTGGTTT GCAGGCATTG ACGGCAGCAC GGTGACCATC
ACCTGGGTAG GCCGTGATAA CAACCAGCCG ACCAAACTGT ATGGAGCCAG CGGGGCAATG
TCGATTTATC AGCGTTATCT GGCTAACCAG ACGCCAACGC CGCTGAATCT TGTTCCGCCA
GAAGATATTG CAGATATGGG CGTGGACTAC GACGGCAACT TTGTTTGCAG CGGTGGCATG
CGTGTCTTGC CGGTCTGGAC CAGCGATCCG CAATCGCTGT GCCAGCAGAG TGAGATGCAG
CAGCAGCCGT CAGGCAATCC GTTTGATCAG TCTTCTCAGC CGCAGCAACA GCCGCAACAG
CAACCTGCTC AGCAAGAGCA GAAAGACAGC GACGGTGTAG CCGGTTGGAT CAAGGATATG
TTTGGTAGTA ATTAA
 
Protein sequence
MAGNDREPIG RKGKPTRPVK QKVSRRRYED DDDYDDYDDY EDEEPMPRKG KGKGKGRKPR 
GKRGWLWLLL KLAIVFAVLI AIYGVYLDQK IRSRIDGKVW QLPAAVYGRM VNLEPDMTIS
KNEMVKLLEA TQYRQVSKMT RPGEFTVQAN SIEMIRRPFD FPDSKEGQVR ARLTFDGDHL
ATIVNMENNR QFGFFRLDPR LITMISSPNG EQRLFVPRSG FPDLLVDTLL ATEDRHFYEH
DGISLYSIGR AVLANLTAGR TVQGASTLTQ QLVKNLFLSS ERSYWRKANE AYMALIMDAR
YSKDRILELY MNEVYLGQSG DNEIRGFPLA SLYYFGRPVE ELSLDQQALL VGMVKGASIY
NPWRNPKLAL ERRNLVLRLL QQQQIIDQEL YDMLSARPLG VQPRGGVISP QPAFMQLVRQ
ELQAKLGDKV KDLSGVKIFT TFDSVAQDAA EKAAVEGIPA LKKQRKLSDL ETAIVVVDRF
SGEVRAMVGG SEPQFAGYNR AMQARRSIGS LAKPATYLTA LSQPKIYRLN TWIADAPIAL
RQPNGQVWSP QNDDRRYSES GRVMLVDALT RSMNVPTVNL GMALGLPAVT ETWIKLGVPK
DQLHPVPAML LGALNLTPIE VAQAFQTIAS GGNRAPLSAL RSVIAEDGKV LYQSFPQAER
AVPAQAAYLT LWTMQQVVQR GTGRQLGAKY PNLHLAGKTG TTNNNVDTWF AGIDGSTVTI
TWVGRDNNQP TKLYGASGAM SIYQRYLANQ TPTPLNLVPP EDIADMGVDY DGNFVCSGGM
RVLPVWTSDP QSLCQQSEMQ QQPSGNPFDQ SSQPQQQPQQ QPAQQEQKDS DGVAGWIKDM
FGSN