Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0152 |
Symbol | mrcB |
ID | 5595317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 163778 |
End bp | 166312 |
Gene Length | 2535 bp |
Protein Length | 844 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640919338 |
Product | penicillin-binding protein 1b |
Protein accession | YP_001456933 |
Protein GI | 157159615 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.94433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGGGA ATGACCGCGA GCCAATTGGA CGCAAAGGGA AACCGACGCG TCCGGTCAAA CAAAAGGTAA GCCGTCGTCG TTACGAAGAT GACGATGATT ACGACGATTA TGATGACTAT GAGGATGAAG AACCGATGCC GCGCAAAGGT AAGGGCAAAG GCAAAGGGCG TAAGCCTCGT GGCAAACGCG GCTGGCTATG GCTACTGCTA AAACTGGCTA TCGTTTTTGC CGTGCTGATC GCCATTTACG GCGTTTATCT CGATCAAAAA ATTCGTAGCC GTATTGATGG CAAGGTCTGG CAACTGCCTG CGGCAGTTTA TGGCCGAATG GTCAATCTTG AGCCAGACAT GACCATCAGC AAGAACGAGA TGGTGAAGCT GCTGGAGGCG ACCCAGTATC GTCAGGTGTC GAAAATGACC CGTCCTGGCG AATTTACCGT GCAGGCTAAC AGCATTGAGA TGATCCGCCG TCCGTTTGAT TTCCCGGACA GCAAAGAAGG GCAGGTGCGT GCGCGTTTGA CCTTTGATGG CGATCATCTG GCGACCATCG TCAATATGGA GAACAACCGT CAGTTCGGTT TCTTCCGTCT TGATCCGCGT CTGATCACCA TGATCTCCTC GCCAAACGGT GAGCAGCGTT TGTTTGTGCC GCGCAGTGGT TTCCCTGATT TGCTGGTGGA TACTTTGCTG GCGACAGAAG ACCGCCATTT CTACGAGCAT GATGGAATCA GTCTCTACTC CATCGGACGT GCGGTGCTGG CAAACCTGAC CGCCGGACGC ACGGTGCAGG GGGCGAGTAC ACTGACGCAA CAGCTGGTGA AAAACCTGTT CCTCTCCAGC GAGCGCTCTT ACTGGCGTAA AGCGAACGAA GCTTACATGG CGCTGATCAT GGACGCGCGT TACAGCAAAG ACCGTATTCT TGAGCTGTAT ATGAACGAGG TGTATCTCGG TCAGAGCGGC GACAACGAAA TCCGCGGCTT CCCGCTGGCG AGCTTGTATT ACTTTGGTCG TCCGGTAGAA GAATTGAGCC TCGATCAGCA GGCGCTGTTA GTCGGTATGG TGAAAGGAGC GTCCATCTAC AACCCGTGGC GTAACCCGAA ACTGGCGCTG GAGCGACGTA ATCTGGTACT GCGTCTGCTG CAACAGCAAC AGATTATTGA TCAAGAACTC TATGACATGT TGAGTGCACG TCCGCTGGGG GTTCAGCCGC GCGGTGGGGT AATCTCTCCA CAGCCAGCCT TTATGCAACT GGTGCGTCAG GAGCTGCAGG CAAAACTGGG CGATAAGGTA AAAGATCTCT CCGGCGTGAA GATCTTCACT ACCTTTGACT CGGTGGCCCA GGACGCGGCA GAAAAAGCCG CCGTGGAAGG CATTCCGGCA CTGAAGAAAC AGCGTAAGTT GAGCGATCTT GAAACTGCGA TTGTGGTCGT CGACCGCTTT AGTGGTGAAG TTCGTGCGAT GGTCGGTGGT TCTGAGCCGC AGTTTGCGGG CTACAACCGT GCGATGCAGG CGCGTCGTTC GATTGGTTCC CTTGCAAAAC CAGCGACTTA CCTGACGGCT TTAAGCCAGC CGAAAATCTA TCGTCTGAAT ACGTGGATTG CGGATGCGCC AATCGCGCTG CGTCAGCCGA ATGGCCAGGT CTGGTCACCG CAGAACGATG ATCGTCGTTA TAGCGAAAGT GGCAGAGTGA TGCTGGTGGA TGCGTTGACC CGTTCGATGA ACGTGCCGAC GGTAAATCTG GGGATGGCGC TGGGGCTGCC TGCGGTTACG GAGACCTGGA TCAAACTGGG CGTGCCGAAA GATCAGTTGC ATCCGGTTCC GGCAATGCTG CTGGGGGCGT TGAACTTAAC GCCAATCGAA GTGGCGCAGG CATTCCAGAC CATCGCCAGC GGTGGTAACC GTGCACCGCT TTCTGCACTG CGTTCGGTAA TCGCGGAAGA TGGCAAGGTG CTGTATCAGA GCTTCCCGCA GGCAGAACGC GCTGTTCCGG CGCAGGCGGC GTATCTGACA CTATGGACCA TGCAGCAGGT GGTACAACGT GGTACGGGTC GTCAGCTTGG GGCGAAATAC CCGAACCTGC ATCTGGCAGG GAAAACAGGG ACTACCAACA ATAACGTAGA TACCTGGTTT GCAGGCATTG ACGGCAGCAC GGTGACCATC ACCTGGGTAG GCCGTGATAA CAACCAGCCG ACCAAACTGT ATGGAGCCAG CGGGGCAATG TCGATTTATC AGCGTTATCT GGCTAACCAG ACGCCAACGC CGCTGAATCT TGTTCCGCCA GAAGATATTG CAGATATGGG CGTGGACTAC GACGGCAACT TTGTTTGCAG CGGTGGCATG CGTGTCTTGC CGGTCTGGAC CAGCGATCCG CAATCGCTGT GCCAGCAGAG TGAGATGCAG CAGCAGCCGT CAGGCAATCC GTTTGATCAG TCTTCTCAGC CGCAGCAACA GCCGCAACAG CAACCTGCTC AGCAAGAGCA GAAAGACAGC GACGGTGTAG CCGGTTGGAT CAAGGATATG TTTGGTAGTA ATTAA
|
Protein sequence | MAGNDREPIG RKGKPTRPVK QKVSRRRYED DDDYDDYDDY EDEEPMPRKG KGKGKGRKPR GKRGWLWLLL KLAIVFAVLI AIYGVYLDQK IRSRIDGKVW QLPAAVYGRM VNLEPDMTIS KNEMVKLLEA TQYRQVSKMT RPGEFTVQAN SIEMIRRPFD FPDSKEGQVR ARLTFDGDHL ATIVNMENNR QFGFFRLDPR LITMISSPNG EQRLFVPRSG FPDLLVDTLL ATEDRHFYEH DGISLYSIGR AVLANLTAGR TVQGASTLTQ QLVKNLFLSS ERSYWRKANE AYMALIMDAR YSKDRILELY MNEVYLGQSG DNEIRGFPLA SLYYFGRPVE ELSLDQQALL VGMVKGASIY NPWRNPKLAL ERRNLVLRLL QQQQIIDQEL YDMLSARPLG VQPRGGVISP QPAFMQLVRQ ELQAKLGDKV KDLSGVKIFT TFDSVAQDAA EKAAVEGIPA LKKQRKLSDL ETAIVVVDRF SGEVRAMVGG SEPQFAGYNR AMQARRSIGS LAKPATYLTA LSQPKIYRLN TWIADAPIAL RQPNGQVWSP QNDDRRYSES GRVMLVDALT RSMNVPTVNL GMALGLPAVT ETWIKLGVPK DQLHPVPAML LGALNLTPIE VAQAFQTIAS GGNRAPLSAL RSVIAEDGKV LYQSFPQAER AVPAQAAYLT LWTMQQVVQR GTGRQLGAKY PNLHLAGKTG TTNNNVDTWF AGIDGSTVTI TWVGRDNNQP TKLYGASGAM SIYQRYLANQ TPTPLNLVPP EDIADMGVDY DGNFVCSGGM RVLPVWTSDP QSLCQQSEMQ QQPSGNPFDQ SSQPQQQPQQ QPAQQEQKDS DGVAGWIKDM FGSN
|
| |