| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0122 |
|---|
| Symbol | acnB |
|---|
| ID | 5591000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 133254 |
|---|
| End bp | 135851 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640919309 |
|---|
| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
|---|
| Protein accession | YP_001456904 |
|---|
| Protein GI | 157159586 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1049] Aconitase B |
|---|
| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000000999933 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGAAG AATACCGTAA GCACGTAGCT GAGCGTGCCG CTGAGGGGAT TGCGCCCAAA
CCCCTGGATG CAAACCAAAT GGCCGCACTT GTAGAGCTGC TGAAAAACCC GCCCGCGGGC
GAAGAAGAAT TCCTGTTAGA TCTGTTAACC AACCGTGTTC CCCCAGGCGT CGATGAAGCC
GCCTATGTCA AAGCAGGCTT CCTGGCTGCT ATCGCGAAAG GCGAAGCCAA ATCCCCTCTG
CTGACTCCGG AAAAAGCCAT CGAACTGCTG GGCACCATGC AGGGTGGTTA CAACATTCAT
CCGCTGATCG ACGCGCTGGA TGATGCCAAA CTGGCACCTA TTGCTGCCAA AGCACTTTCT
CACACGCTGC TGATGTTCGA TAACTTCTAT GACGTAGAAG AGAAAGCGAA AGCAGGCAAC
GAATATGCGA AGCAGGTTAT GCAGTCCTGG GCGGATGCCG AATGGTTCCT GAATCGCCCG
GCGCTGGCTG AAAAACTGAC CGTTACCGTC TTCAAAGTCA CTGGCGAAAC TAACACCGAT
GACCTTTCTC CGGCACCGGA TGCGTGGTCA CGCCCGGATA TCCCACTGCA CGCGCTGGCG
ATGCTGAAAA ACGCCCGTGA AGGTATTGAG CCAGACCAGC CTGGTGTTGT TGGTCCGATC
AAGCAAATCG AAGCTCTGCA ACAGAAAGGT TTCCCGCTGG CGTACGTCGG TGACGTTGTG
GGTACGGGTT CTTCGCGTAA ATCCGCCACT AACTCCGTTC TGTGGTTTAT GGGCGATGAT
ATTCCACATG TGCCGAACAA ACGCGGCGGT GGTTTGTGCC TCGGCGGTAA AATTGCACCC
ATCTTCTTTA ACACGATGGA AGACGCGGGT GCACTGCCAA TCGAAGTCGA CGTCTCTAAC
CTGAACATGG GCGACGTGAT TGACGTTTAC CCGTACAAAG GTGAAGTGCG TAACCACGAA
ACCGGCGAAC TGCTGGCGAC CTTCGAACTG AAAACCGACG TGCTGATTGA TGAAGTGCGT
GCTGGTGGCC GTATTCCGCT GATTATCGGG CGTGGCCTGA CCACCAAAGC GCGTGAAGCA
CTTGGTCTGC CGCACAGTGA TGTGTTCCGT CAGGCGAAAG ATGTCGCTGA GAGCGATCGC
GGCTTCTCGC TGGCGCAAAA AATGGTAGGC CGTGCCTGTG GCGTGAAAGG CATTCGTCCG
GGCGCGTACT GTGAACCGAA AATGACTTCT GTAGGTTCCC AGGACACCAC CGGCCCGATG
ACCCGTGATG AACTGAAAGA CCTGGCGTGC CTGGGCTTCT CGGCTGACCT GGTGATGCAG
TCTTTCTGCC ACACCGCGGC GTATCCGAAG CCAGTTGACG TGAACACGCA CCACACGCTG
CCGGACTTCA TTATGAACCG TGGCGGTGTG TCGCTGCGTC CGGGTGACGG CGTCATTCAC
TCCTGGCTGA ACCGTATGCT GCTGCCGGAT ACCGTCGGTA CCGGTGGTGA TTCCCATACC
CGTTTCCCGA TCGGTATCTC TTTCCCGGCG GGTTCTGGTC TGGTGGCATT TGCAGCCGCA
ACAGGCGTAA TGCCGCTGGA TATGCCGGAA TCCGTTCTGG TGCGCTTCAA AGGCAAAATG
CAGCCGGGCA TCACCCTGCG CGATCTGGTA CATGCCATTC CGCTGTATGC GATCAAACAA
GGTCTGCTGA CCGTTGAGAA GAAAGGCAAG AAAAACATCT TCTCTGGCCG CATCCTGGAA
ATTGAAGGTC TGCCGGATCT GAAAGTTGAG CAGGCATTTG AACTGACCGA TGCGTCCGCC
GAGCGTTCTG CCGCTGGTTG TACCATCAAG CTGAACAAAG AACCGATCAT CGAATACCTG
AACTCTAACA TCGTCCTGCT GAAGTGGATG ATCGCGGAAG GTTACGGCGA TCGTCGCACC
CTGGAACGTC GTATTCAGGG CATGGAAAAA TGGCTGGCGA ATCCTGAGCT GCTGGAAGCC
GATGCAGATG CTGAATACGC GGCAGTGATC GACATCGATC TGGCGGATAT TAAAGAGCCA
ATCCTCTGTG CACCGAACGA CCCGGATGAC GCGCGTCCGC TGTCTGCGGT ACAGGGTGAG
AAGATCGACG AAGTATTTAT CGGTTCCTGC ATGACCAACA TCGGTCACTT CCGTGCTGCG
GGTAAACTGC TGGATGCGCA CAAAGGCCAA CTGCCGACCC GCCTGTGGGT GGCACCGCCA
ACCCGTATGG ACGCCGCGCA GTTGACTGAA GAAGGCTACT ACAGCGTCTT CGGTAAGAGT
GGTGCGCGTA TCGAGATCCC TGGCTGTTCC CTGTGTATGG GTAACCAGGC GCGTGTAGCA
GACGGTGCGA CGGTGGTTTC CACCTCTACC CGTAACTTCC CGAACCGTCT GGGTACTGGC
GCGAATGTCT TCCTGGCTTC TGCGGAACTG GCGGCTGTTG CGGCGCTGAT TGGCAAACTG
CCGACGCCGG AAGAGTACCA GACCTACGTG GCGCAAGTAG ATAAAACTGC CGTTGATACT
TATCGTTATC TGAACTTCAA CCAGCTTTCT CAGTACACCG AAAAAGCCGA TGGGGTGATT
TTCCAGACTG CGGTGTAA
|
|---|
| Protein sequence | MLEEYRKHVA ERAAEGIAPK PLDANQMAAL VELLKNPPAG EEEFLLDLLT NRVPPGVDEA
AYVKAGFLAA IAKGEAKSPL LTPEKAIELL GTMQGGYNIH PLIDALDDAK LAPIAAKALS
HTLLMFDNFY DVEEKAKAGN EYAKQVMQSW ADAEWFLNRP ALAEKLTVTV FKVTGETNTD
DLSPAPDAWS RPDIPLHALA MLKNAREGIE PDQPGVVGPI KQIEALQQKG FPLAYVGDVV
GTGSSRKSAT NSVLWFMGDD IPHVPNKRGG GLCLGGKIAP IFFNTMEDAG ALPIEVDVSN
LNMGDVIDVY PYKGEVRNHE TGELLATFEL KTDVLIDEVR AGGRIPLIIG RGLTTKAREA
LGLPHSDVFR QAKDVAESDR GFSLAQKMVG RACGVKGIRP GAYCEPKMTS VGSQDTTGPM
TRDELKDLAC LGFSADLVMQ SFCHTAAYPK PVDVNTHHTL PDFIMNRGGV SLRPGDGVIH
SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM
QPGITLRDLV HAIPLYAIKQ GLLTVEKKGK KNIFSGRILE IEGLPDLKVE QAFELTDASA
ERSAAGCTIK LNKEPIIEYL NSNIVLLKWM IAEGYGDRRT LERRIQGMEK WLANPELLEA
DADAEYAAVI DIDLADIKEP ILCAPNDPDD ARPLSAVQGE KIDEVFIGSC MTNIGHFRAA
GKLLDAHKGQ LPTRLWVAPP TRMDAAQLTE EGYYSVFGKS GARIEIPGCS LCMGNQARVA
DGATVVSTST RNFPNRLGTG ANVFLASAEL AAVAALIGKL PTPEEYQTYV AQVDKTAVDT
YRYLNFNQLS QYTEKADGVI FQTAV
|
|---|
| |