| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A0098 |
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| Symbol | ddl |
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| ID | 5594091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 103988 |
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| End bp | 104908 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640919286 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001456881 |
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| Protein GI | 157159563 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000000699622 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATA AAATCGCGGT CCTGTTGGGC GGGACTTCCG CTGAGCGGGA AGTTTCTCTG
AATTCTGGCG CAGCGGTGTT AGCCGGGCTG CGTGAAGGCG GTATTGATGC GTATCCTGTC
GACCCGAAAG AAGTCGACGT GACGCAACTG AAGTCGATGG GTTTTCAGAA AGTGTTTATC
GCGCTACACG GTCGCGGCGG TGAAGATGGT ACGCTGCAGG GCATGCTCGA GCTGATGGGC
TTGCCTTATA CCGGCAGCGG AGTGATGGCA TCTGCGCTTT CAATGGATAA ACTACGCAGC
AAACTGCTGT GGCAAGGTGC CGGTTTACCG GTCGCGCCGT GGGTAGCGTT AACCCGCGCA
GAGTTTGAAA AAGGCCTGAG CGATAAGCAG TTAGCAGAAA TTTCTGCTCT GGGTTTGCCG
GTTATCGTTA AGCCGAGCCG CGAAGGTTCC AGTGTGGGAA TGTCAAAAGT AGTAGCAGAA
AATGCTCTAC AAGATGCATT AAGATTGGCA TTTCAGCACG ATGAAGAAGT ATTGATTGAA
AAATGGCTAA GTGGGCCGGA GTTCACGGTT GCGATACTCG GTGAAGAAAT TTTACCGTCA
ATACGTATTC AACCGTCCGG AACCTTCTAT GATTATGAGG CGAAGTATCT CTCTGATGAG
ACACAGTATT TCTGCCCCGC AGGTCTGGAA GCGTCACAAG AGGCCAATTT GCAGGCATTA
GTGCTGAAAG CATGGACGAC GTTAGGTTGC AAAGGATGGG GACGTATTGA CGTTATGCTG
GACAGCGATG GACAGTTTTA TCTGCTGGAA GCCAATACCT CACCGGGTAT GACCAGCCAC
AGCCTGGTGC CGATGGCGGC ACGTCAGGCA GGTATGAGCT TCTCGCAGTT GGTAGTACGA
ATTCTGGAAC TGGCGGACTA A
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| Protein sequence | MTDKIAVLLG GTSAEREVSL NSGAAVLAGL REGGIDAYPV DPKEVDVTQL KSMGFQKVFI
ALHGRGGEDG TLQGMLELMG LPYTGSGVMA SALSMDKLRS KLLWQGAGLP VAPWVALTRA
EFEKGLSDKQ LAEISALGLP VIVKPSREGS SVGMSKVVAE NALQDALRLA FQHDEEVLIE
KWLSGPEFTV AILGEEILPS IRIQPSGTFY DYEAKYLSDE TQYFCPAGLE ASQEANLQAL
VLKAWTTLGC KGWGRIDVML DSDGQFYLLE ANTSPGMTSH SLVPMAARQA GMSFSQLVVR
ILELAD
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