Gene EcHS_A0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0058 
SymbolpdxA 
ID5592043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp55689 
End bp56678 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content56% 
IMG OID640919246 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_001456841 
Protein GI157159523 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0697473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAA CCCAACGTGT TGTGATCACT CCCGGCGAGC CCGCCGGGAT TGGCCCGGAC 
TTAGTTGTCC AGCTTGCACA GCGTGAGTGG CCGGTCGAAC TGGTTGTTTG TGCCGATGCC
ACTCTCCTTA CCGACCGGGC AGCGATGCTC GGTTTGCCGC TCACCCTCCG CCCTTATTCC
CCCAACTCCC CTGCACAACC GCAAACTACG GGCACATTAA CGCTACTTCC TGTCGCGCTA
CGTGAATCTG TCACTGCGGG GCAGTTAGCG ATTGAAAATG GGCATTACGT GGTGGAGACG
CTGGCGCGAG CGTGTGATGG CTGTCTGAAC GGTGAATTTG CTGCGCTGAT CACAGGCCCC
GTGCATAAAG GCGTCATTAA CGACGCAGGC ATTCCGTTTA CCGGTCATAC CGAGTTTTTC
GAAGAGCGTT CGCAGGCGAA AAAAGTGGTG ATGATGCTGG CGACCGAAGA ACTTCGCGTG
GCGCTGGCAA CGACGCATTT ACCGCTGCGC GATATCGCAG ATGCTATCAC CCCTGCACTT
TTGCACGAAG TGATTGCTAT TTTACATCAC GATTTGCGTA CAAAATTTGG TATTGCCGAA
CCGCGCATTC TGGTCTGCGG GCTGAATCCG CACGCGGGCG AAGGCGGTCA TATGGGTACG
GAAGAGATAG ACACCATTAT TCCGGTGCTC GACGAGCTGC GGGCGCAGGG GATGAAACTC
AACGGGCCTC TGCCTGCCGA TACCCTGTTT CAGCCGAAAT ATCTCGATAA CGCCGACGCC
GTGCTGGCGA TGTACCACGA TCAGGGTCTT CCCGTGCTAA AATACCAGGG CTTCGGGCGC
GGTGTGAACA TTACGCTGGG CCTGCCCTTT ATTCGCACAT CAGTGGACCA CGGCACCGCG
CTTGAACTGG CGGGACGTGG CGAAGCCGAT GTCGGCAGTT TTATTACGGC GCTTAATCTC
GCCATCAAAA TGATTGTTAA CACCCAATGA
 
Protein sequence
MVKTQRVVIT PGEPAGIGPD LVVQLAQREW PVELVVCADA TLLTDRAAML GLPLTLRPYS 
PNSPAQPQTT GTLTLLPVAL RESVTAGQLA IENGHYVVET LARACDGCLN GEFAALITGP
VHKGVINDAG IPFTGHTEFF EERSQAKKVV MMLATEELRV ALATTHLPLR DIADAITPAL
LHEVIAILHH DLRTKFGIAE PRILVCGLNP HAGEGGHMGT EEIDTIIPVL DELRAQGMKL
NGPLPADTLF QPKYLDNADA VLAMYHDQGL PVLKYQGFGR GVNITLGLPF IRTSVDHGTA
LELAGRGEAD VGSFITALNL AIKMIVNTQ