Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A0038 |
Symbol | caiF |
ID | 5593861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 37558 |
End bp | 37953 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640919226 |
Product | DNA-binding transcriptional activator CaiF |
Protein accession | YP_001456821 |
Protein GI | 157159503 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 82 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGAAG GATATGTTGA AAAACCACTC TACTTGTTAA TCGCCGAATG GATGATGGCT GAAAATCGGT GGGTGATAGC AAGAGAGATC TCTATTCATT TCGATATTGA ACACAGCAAG GCGGTTAATA CCCTGACTTA TATTCTGTCG GAAGTCGCAG AAATAAGCTG CGAAGTTAAG ATGATCCCTA ATAAGCTGGA AGGACGGGGA TGCCAGTGCC AGCGACTGGT AAAAGTGGTC GATATCGATG AGCAAATTTA CGCGCGCCTG CGCAATAACA GCCGGGATAA ATTAGTCGGC GTAAGAAAGA CGCCGCGTAT TCCTGCCGTT CCGCTCACGG AACTTAACCG CGAGCAGAAG TGGCAGATGA TGTTGTCAAA GAGTATGCGT CGTTAA
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Protein sequence | MCEGYVEKPL YLLIAEWMMA ENRWVIAREI SIHFDIEHSK AVNTLTYILS EVAEISCEVK MIPNKLEGRG CQCQRLVKVV DIDEQIYARL RNNSRDKLVG VRKTPRIPAV PLTELNREQK WQMMLSKSMR R
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