Gene EcE24377A_F0024 details

Gene Information

• Locus tag: EcE24377A_F0024
• ID: 5585626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009786
• Strand: +
• Start bp: 20662
• End bp: 22626
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640913743
• Product: plasmid partition protein B
• Protein accession: YP_001451393
• Protein GI: 157149342
• COG category: [K] Transcription
• COG ID: [COG1475] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR00180] ParB-like partition proteins

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTA CAGAGTTTAA GGTAAAAGCG GGGCGTAAAT CCAGCAGTAA ACCGTCAAAA 
GTGCAGGAGA CTGCACTGTC TGCCCTGCTG GCGCAGACGG AGGAAGTGAG CGTGTCGCTG 
GCCTCACTGA TTAAGTCACC GCTGAATGTG CGCACGGTGC CGTATTCCGC AGAGTCCGTC 
AGCGAACTGG CGGAGTCCAT TAAGGGCGTT GGCCTGTTGC AGAATCTGGT TGTTCATGCC 
CTGCCTGGTG ACCGCCACGG TGTCGCCGCA GGTGGTCGCC GACTGGCAGC ACTCAACATG 
CTGGCAGAGC GTGGCATCCT TCCGGCTGAC TGGCCTGTCC GTGTGAAGGT CATTCCGCAG 
GAACTGGCGA CTGCCGCATC AATGACTGAA AACGGTCATC GTCGGGATAT GCACCCTGCC 
GAACAGATTG CCGGATTCCG CGCAATGGCG CAGGAAGGCA AAACACCTGC ACAAATTGGT 
GATTTGCTGG GCTATTCGCC CCGCCATGTC CAGCGAATGC TGAAACTGGC TGACCTTGCG 
CCTGTCATCC TCGATGCGCT GGCAGAAGAC CGCATCACCA CCGAACACTG TCAGGCGCTG 
GCGCTGGAGA ACGACACCGC GCGTCAGGTG CAGGTGTTTG AAGCCGCCTG TCAGTCGGGA 
TGGGGCGGTA AACCGGAAGT ACAGACCATT CGTCGTCTGG TGACCGAAAG TGAAGTGGCG 
GTGGCGGGGA ACAGTAAATT CCGCTTTGTA GGGGCTGATG CCTTCTCGCC AGATGAACTG 
CGCACCGATT TGTTCAGCGA CGACGAAGGT GGCTATGTGG ACTGCGTGGC GCTCGATGCC 
GCCCTGCTGG AAAAACTCCA GGCTGTTGCT GAACACCTTC GGGAAGCCGA AGGCTGGGGA 
TGGTGCGCCG GACGCATGGA GCCTGTCGGT GAGTGCCGTG AGGATGCCGG AACATACCGC 
TGTCTGCCGG AGCCGGAAGC GGTGCTGACG GAGGCGGAAG AAGAACGTCG GAACGAACTG 
ATGACGCGTT ACGACGCGCT GGAAAACCAG TGTGAGGAAT CTGACCTGCT GGAAGCAGAA 
ATGAAGCTGA TGCGCTGCAT GGCGAAGGTC AGAGCGTGGA CGCCGGAGAT GCGTGCCGGA 
GGTGGGGTGG TGGTGTCCTG GCGTTATGGC AACGTGTGTG TCCAGCGTGG TGTGCAGTTG 
CGCAGTGAGG ATGACGTGGC TGACGACGCT GACCGTACGG AACAGGTACA GGAGAAAGCG 
TCAGTGGAGG AAATAAGTCT GCCACTGCTG ACGAAAATGT CTTCCGAACG CACGCTGGCA 
GTCCAGGCAG CACTGATGCA GCAACCGGAC AAATCCCTGG CACTGCTGGC ATGGACGCTC 
TGCCTGAATG TGTTTGGCAG CGGAGCGTAC AGTAAACCAG CACAAATCAG CCTGGAATGT 
AAACATTATT CGCTGACCAG CGATGCGCCG TCAGGGAAGG ATGGTGCCGC ATTCATGGCG 
CTGATGGCAG AAAAAGCCCG TCTTGCGGCC CTGTTACCGG AGGGATGGTC ACGGGACATG 
ACGACGTTCC TGTCACTCAG TCAGGAGGTG CTGTTATCCC TGCTCAGTTT CTGCACTGCG 
AGCAGCATCC ACGGTGTTCA GGCCCGTGAG TATGGTCACA CGTCACGCAG TCCGCTGGAT 
TCGCTGGAAA GCGCCATCGG CTTTCACATG CGCGACTGGT GGCAGCCGAC AAAAGCAAAC 
TTCTTCGGAC ACCTGAAAAA GCCGCAGATT ATCGATGCCC TGAATGATGC AGGACTGTCC 
GGTGCTGCAC GGGACGCGGA GAAAATGAAG AAAGGCGATG CGGCTGAACA TGCAGAGTTC 
CACATGAAAG ACAACCGCTG GGTGCCTGGC TGGATGTGTA CACCACGTCC ACAGGCAGAG 
ACGGAAACCA TGGAGTACCG TGACAACCAG GCCGATGCCG CCTGA 

 

Protein sequence

MSVTEFKVKA GRKSSSKPSK VQETALSALL AQTEEVSVSL ASLIKSPLNV RTVPYSAESV 
SELAESIKGV GLLQNLVVHA LPGDRHGVAA GGRRLAALNM LAERGILPAD WPVRVKVIPQ 
ELATAASMTE NGHRRDMHPA EQIAGFRAMA QEGKTPAQIG DLLGYSPRHV QRMLKLADLA 
PVILDALAED RITTEHCQAL ALENDTARQV QVFEAACQSG WGGKPEVQTI RRLVTESEVA 
VAGNSKFRFV GADAFSPDEL RTDLFSDDEG GYVDCVALDA ALLEKLQAVA EHLREAEGWG 
WCAGRMEPVG ECREDAGTYR CLPEPEAVLT EAEEERRNEL MTRYDALENQ CEESDLLEAE 
MKLMRCMAKV RAWTPEMRAG GGVVVSWRYG NVCVQRGVQL RSEDDVADDA DRTEQVQEKA 
SVEEISLPLL TKMSSERTLA VQAALMQQPD KSLALLAWTL CLNVFGSGAY SKPAQISLEC 
KHYSLTSDAP SGKDGAAFMA LMAEKARLAA LLPEGWSRDM TTFLSLSQEV LLSLLSFCTA 
SSIHGVQARE YGHTSRSPLD SLESAIGFHM RDWWQPTKAN FFGHLKKPQI IDALNDAGLS 
GAARDAEKMK KGDAAEHAEF HMKDNRWVPG WMCTPRPQAE TETMEYRDNQ ADAA