Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_07096 |
Symbol | |
ID | 5557419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 2168097 |
End bp | 2171228 |
Gene Length | 3132 bp |
Protein Length | 1043 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640911563 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001449196 |
Protein GI | 156978289 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTG CAAAGAACGT GTTAACACCG GAATTTATCG AGCAGCCGCT TGATAAGTTG TGGTCACTGA TCTCGCCATT GTACATGGTG GACGAGTCTC AATGGCTAGA GCAATTATTG CCACTAGCGA CGCCGACAGC GGAAGAAAAA TCGGCAATCA CGATCCAAAC AACCCAGCTT ATCGAAGCCA TCCGTACGGA TAAGAAGTCA ATTCAGATGA TTGATGCGCT ACTGCTGGAA TACAGCTTAG ATACTCATGA AGGTATCTTG CTGATGTGTC TTGCAGAAGC ATTGATGCGT ATTCCGGATT CAGCAACGGC GGATGCACTG ATTAAAGATA AGTTAAGCGT TGCTGACTGG AAATCTCACC TAAAGAGTTC TGATTCGGTT TTCGTTAACG CGTCAACTTG GGGCTTAATG CTAACGGGTA AAGTGATTGG TCTTGGTGAG CAAGAAACCC AGAGCCCAGG TCAGGCTGTA AACCGTCTGG TGAACAAATT CTCAGAACCT GTGATTCGTA AAGCCATGTA TCAGGCAATG AAGATCATGG GTCATCAGTT TGTACGTGGT CGTACGATTG AAGAAGCACA GAAGAACGGT CGCCCAATGC GCGACAAAGG TTTCACTTAC TCATTTGATA TGTTGGGTGA AGCGGCGCTA ACCACGGCAG ACGCAAGCAA GTATTTCAAA GACTACCTAA TGGCGATTGA AGCCGTTGGT CGCGAAACGT ACGGCAGTGA CACAAGCCCT GCACCTTCTG TTTCTATCAA GCTTTCTGCA CTTCACCCAC GTTACGAAGT GGCGAATGAA GAACGCGTGA TGACAGAGCT TTACGACACC TTAACGCAAC TGCTTAAGCG CGCTATCGAG GTGGATGTTG CCATCACGAT TGATGCAGAG GAAGCGGACC GTCTTGAGCT GTCATTAAAA CTGTTTGAAA AACTGTATCG CAGTGACCTA GTGAAAGGCT GGAGTAAGTT TGGTCTGGTG GTTCAAGCCT ACTCGAAACG TACACTGCCA GTATTGGTAT GGCTAAACGG TCTAGCGAAA GAGCAGGGTG ATCTGATCCC ACTGCGTCTA GTAAAAGGCG CGTACTGGGA CAGCGAAATC AAGTGGTCGC AACAAGCGGG TTACGAGAAC TACCCTGTTT ACACGCGCAA AGAAGCGACG GATGTTGCTT ACCTAGCGTG TGCTCGCTTC CTACTAAGTG AAGGCGTTCG TGGCAATATC TTCCCGCAGT TTGCTAGTCA CAACGCGCAC ACTGTTACGG CGATTGCTGT AATGGCAGAG CACAAAGATT ACGAATTCCA ACGTCTGCAT GGTATGGGTG ATTCGCTTTA TAACCATGTA ATGGACACTT ATGGTCAGCC AGTACGTATT TACGCGCCAG TCGGTAGCCA TGCGGATCTA CTGCCTTACT TGGTTCGTCG CTTACTAGAA AACGGTGCGA ACAGCTCGTT TGTGCACCGT TTGGTGGACG CGCGTTGTCC GATTTCAGAG CTGACGCATC ACCCTGTTGA TGTGCTGACC TCTTTTGAGA CGCTACACAA CGGTCAAATT CCAATGCCAA CCGGCATCTT CCCAGAGCGT AAAAACTCGT ACGGTGTGAA CGTTGATATC GATAGCGAAG CGAAGCCGTT TGAAGCGCAG GTTGAAAGCT TCCTGAATCA GAAGTGGACT GCGGGTCCGA TCATCAACGG CGAAAAACAT GCCGAAAGCA TGATCAAGGA AAACTCCGCA GAGATCATTA CTGCCCCTTA CGATCGTCGT ATTGAAGTGG GTCAGGTGGC TTTCGCAAGC CTTGATCATG TTTCCGCTGC AATCGAAGCG GCTGATGCTG CATTCCCAGA GTGGAAAGGC ACCGCAATTG AACAAAAAGC GGCGTGCCTA GATAAGCTTG CGGATCTGAT GGAAGAAAAC TTGGCTGAGC TGGTGGCGAT TTGTCACCAA GAAGCAGGTA AGACGATTCA TGACAGTATT GATGAAGTGC GTGAAGCGGT CGATTTCTGT CGTTACTACG TGAAACAAGC GCAAAACCTT CAACCGTTCG AATTAGAAGG CTTTGATGGC GTGAAACGCA TTTCTAGCCG CGAAGGGCTT GGCGTATTCG TTTGTATCAG TCCATGGAAC TTCCCATTAG CGATCTTCCT TGGTCAAGTC ACAGCGGCAT TGGTTGCAGG TAACACAGTT GTGGCTAAGC CAGCTGAGCA AACCAGCTTA ATTGCGGCGC GTACGATTGA ACTGATGCTA GAAGCCGGCT TCCCGGCGGG CGTGATTCAG CTATTGCCGG GTCGTGGTGG TGAAATTGGT CATGCACTAA CGTCTCATGA TGCGATTGCT GGTGTGGCAT TTACTGGTTC GACAGCAACG GCGCAGCGCA TCAACGTGAC GCTTGCCGAG CGTAGCGCGA AGCCAGTACC GTTTATCGCT GAAACTGGCG GTCAAAACGC CATGATTGTG GATAGTACGG CGCTACCAGA GCAAGTTGTG CGTGATGTGA TTCGTTCCGC TTTCGCTTCT GCTGGTCAAC GTTGTTCCGC TCTGCGCGTT CTGTTCGTTC AAGAAGACGT TGCGGATCGC ATCATCAACC TTATCCAAGG TGCAATGAAT GAACTGCATG TTGGTATTCC TTACCTACAC AAAACCGATG TGGGTCCGGT TATCGACAGC AATGCAAAGA ACAAACTCCT TGCTCACCTA GAGCACATGA CAAGTACGCA AACCAAAGTT GCTCAATTGC AGTTGGATGA AGCGTGTCAG CACGGTGATT TTGTATCACC AAGTGCGTTC GAAATCTCGG GCATTGATGT TCTGAAAGAA GAGCAATTCG GTCCTATCTT GCACATTGTT CGCTTTAAAG CGTCTGAGTT GCCAAATGTG GTTGAGCAAA TCAACCAAAC TGGTTTTGGT CTCACAATGG GCATCCACAG CCGTAACGAA ACCACTTACC GTTGGATTGA AAAACACGCT CGTGTGGGTA ACTGCTACAT CAACCGCGAT CAGGTCGGTG CGGTGGTTGG CGTTCAGCCA TTCGGTGGTC AAGGTTTGTC GGGTACGGGT CCGAAGGCTG GTGGTCCTCA CTACCTATAC CGCTTTACTA AACAACATCT TGCTCAAGCA GAGAAGGCGT AA
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Protein sequence | MFTAKNVLTP EFIEQPLDKL WSLISPLYMV DESQWLEQLL PLATPTAEEK SAITIQTTQL IEAIRTDKKS IQMIDALLLE YSLDTHEGIL LMCLAEALMR IPDSATADAL IKDKLSVADW KSHLKSSDSV FVNASTWGLM LTGKVIGLGE QETQSPGQAV NRLVNKFSEP VIRKAMYQAM KIMGHQFVRG RTIEEAQKNG RPMRDKGFTY SFDMLGEAAL TTADASKYFK DYLMAIEAVG RETYGSDTSP APSVSIKLSA LHPRYEVANE ERVMTELYDT LTQLLKRAIE VDVAITIDAE EADRLELSLK LFEKLYRSDL VKGWSKFGLV VQAYSKRTLP VLVWLNGLAK EQGDLIPLRL VKGAYWDSEI KWSQQAGYEN YPVYTRKEAT DVAYLACARF LLSEGVRGNI FPQFASHNAH TVTAIAVMAE HKDYEFQRLH GMGDSLYNHV MDTYGQPVRI YAPVGSHADL LPYLVRRLLE NGANSSFVHR LVDARCPISE LTHHPVDVLT SFETLHNGQI PMPTGIFPER KNSYGVNVDI DSEAKPFEAQ VESFLNQKWT AGPIINGEKH AESMIKENSA EIITAPYDRR IEVGQVAFAS LDHVSAAIEA ADAAFPEWKG TAIEQKAACL DKLADLMEEN LAELVAICHQ EAGKTIHDSI DEVREAVDFC RYYVKQAQNL QPFELEGFDG VKRISSREGL GVFVCISPWN FPLAIFLGQV TAALVAGNTV VAKPAEQTSL IAARTIELML EAGFPAGVIQ LLPGRGGEIG HALTSHDAIA GVAFTGSTAT AQRINVTLAE RSAKPVPFIA ETGGQNAMIV DSTALPEQVV RDVIRSAFAS AGQRCSALRV LFVQEDVADR IINLIQGAMN ELHVGIPYLH KTDVGPVIDS NAKNKLLAHL EHMTSTQTKV AQLQLDEACQ HGDFVSPSAF EISGIDVLKE EQFGPILHIV RFKASELPNV VEQINQTGFG LTMGIHSRNE TTYRWIEKHA RVGNCYINRD QVGAVVGVQP FGGQGLSGTG PKAGGPHYLY RFTKQHLAQA EKA
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