| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_07089 |
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| Symbol | |
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| ID | 5558827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 2159925 |
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| End bp | 2161385 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640911555 |
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| Product | hypothetical protein |
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| Protein accession | YP_001449188 |
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| Protein GI | 156978282 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACAT GCTCGGTTAA TAATAATAAG ATCAAAAAGA TAAACCGTCT TTATAGAACA
AGGAATGTGA TGAGCCGAGA CAACTACAAC AAACTGAGCA GCGACGAGCT AGACTTTGTT
GATGACAAAA CCGCTGCTTT GCTCTTAAAC ACGCCAAATA GTGCCCGCTT AATGCTGTGG
GTGATGGCGC TGTTTTTTGT AGCGGCCATT GGCTGGGCAT CTTGGGCTGA GATCGACAAA
GTGACCGTAG GCCAAGGCAA AGTCATTCCA TCTTCTCAAA TCCAAGTGGT GCAGAACTTA
GAAGGTGGCT TGGTCAAAAA GATATTAGTT AAAGAGGGTC AAAAAGTTCA GAAAGATCAG
CAGTTGCTGC TGATTGACGA CACCCGCTTC CGCTCTGACT TTCGTGAACG TGAACAGCAA
GTTGCCAACT TAACCGCTTC AGTACTGCAT CTCTCAGCCT CAATCAACAG TGTCGAAGTC
AATCGTGATT TTGACGACAG TAACTGGGAA AAGAATGTCG TTATCGACTA TGGCAAACTG
ACGTTCCCAC CGATACTTGA AGAGAACCGC CCTCGCCTGA CTCAACGTCA GAAAGCAGAA
TACCGCGAAG ACTTGGATAA CCTGCGCAGC CAAATTTCGG TCATAGACCA ACAAGTTAAG
CAGAAACAAC AGGATTTGGT GGAGATTCAA GCGCGTGTGA GCAACCTTCG TCAAAGCTAT
CGTTATGCAA AGAAAGAACT GGATATCACC AAACCTCTGG CTGATGAAGG CGTCGTACCT
AGAATTGAAC TCTTAAAGCT TCAACGTCAG GTGAACGACA CCCGTCGAGA AATGACGTCT
AGCGAGTTGA AGATCCCTGT CATCAAATCG GGCATCCGTG AATCGATGCT CAACCGTATC
GATGTCGCGT TGAAATTCCG CTCCGAGCAA CAAGAAAAAC TCAACAGCAC ACAAGACCAG
CTCTCAGCAC TAGTCGAATC AGCGGTAGGC TTGGAAGACC GAGTAAACCG AACTGTGGTG
GTTTCTCCAG TAACGGGCAC CATCAAGACA TTGAACGTCA ACACCGTCGG TGGCGTTATC
CAGCCGGGTA TGGACATCGT AGAAATCGTG CCGACCGAAG ACACCTTATT AGTGGAAGCG
AAGATCGCGC CGAAGGACAT CGCTTTCTTG CGTCCAGATC TTCATGCGAT TGTGAAATTC
ACTGCGTACG ACTTCACTAA ATACGGCGGC TTAGAAGGAG AGTTGGAACA CATTAGTGCC
GACACCACAC AAGACGAAGA AGGCAACAGC TTCTACATCG TCCGTATACG CACAGAGAAA
ACCAGTTTCG GACAAGATGC GGACTTACCT ATCATTCCAG GTATGACGGC ATCTGTTGAT
ATCATCACAG GGAAACGAAC GGTACTAGAA TATCTACTCA AGCCGATTTT GAGCGCCAAA
ACCAACGCAC TGAAGGAGTA A
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| Protein sequence | MLTCSVNNNK IKKINRLYRT RNVMSRDNYN KLSSDELDFV DDKTAALLLN TPNSARLMLW
VMALFFVAAI GWASWAEIDK VTVGQGKVIP SSQIQVVQNL EGGLVKKILV KEGQKVQKDQ
QLLLIDDTRF RSDFREREQQ VANLTASVLH LSASINSVEV NRDFDDSNWE KNVVIDYGKL
TFPPILEENR PRLTQRQKAE YREDLDNLRS QISVIDQQVK QKQQDLVEIQ ARVSNLRQSY
RYAKKELDIT KPLADEGVVP RIELLKLQRQ VNDTRREMTS SELKIPVIKS GIRESMLNRI
DVALKFRSEQ QEKLNSTQDQ LSALVESAVG LEDRVNRTVV VSPVTGTIKT LNVNTVGGVI
QPGMDIVEIV PTEDTLLVEA KIAPKDIAFL RPDLHAIVKF TAYDFTKYGG LEGELEHISA
DTTQDEEGNS FYIVRIRTEK TSFGQDADLP IIPGMTASVD IITGKRTVLE YLLKPILSAK
TNALKE
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