| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06935 |
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| Symbol | |
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| ID | 5556975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 2029745 |
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| End bp | 2031085 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640911403 |
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| Product | Na+-driven multidrug efflux pump |
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| Protein accession | YP_001449036 |
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| Protein GI | 156978130 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAA GCCAGAATAT CAACCAACGT ATGTCCATCG TGGCATTGGC TTGGCCGATA
CTTGTCGAAA TTTTGCTACG GACGGCTTTA GGAACCAGTG ACGTATTCAT GTTGAGTGGT
TACTCAGACA AAGCCGTGTC TGCGGTTGGG GTAATCACAC AGTTAACGTT TTTCCTGATC
ATCGTTTCTA CCTTTGTCAG CAGCGGCACG GGTATCTTGA TCGCGCAATA CAATGGCGCA
GGGCGTGAGA AAGACTCCGT TGATGTCGGT GTTGCCAGTA TCGCTTTGTC GGTGATTGTA
GGTGCTTTCT TGAGTGTGCT GGCCGTGATT GGCGCGGTGT TCTTTTTGCC GTATTACGGG
CTAGAGGCTC AAGTTGAGCA GTATGCGCGT GAATATTTGC TTATCAGCGG TGCGATGACA
TTCAACGTCA CCATCGGTAT TGTCTTCACC ACGATTCTAC GTAGCCACGG TTATTCACGC
TCGCCAATGG TCGTTAACCT AATTTCTGGC GTGTTCAACA TCATCGGTAA CTACATTGCG
CTGTATCAGC CGTTTGGTTT GCCTGTGTAT GGCGTTGAAG GTGTTGCAGT GGCGACAGTC
GTGAGCCAAG TAATCGGTAC ATTATTGTTG GGCCTGATTT TGAAACGCAG CAGCATCGAA
CTGCCAATGT CTAAGCTTAA ACAAGTGCCG AAAGATGTGT TCAAGAAGAT CCTAAAAATC
GGTGGCATGA ACGCGGGTGA AGTGCTGTCA TACAACATGG CGCAAATCTG TATCGTCTAC
TTTGTGGTGC AAATGGGCAC CTCTTCGCTC GCGGCATTTA CTTATGCACA AAACATCGCG
CGTTTCTCTT TCGCGTTTGC GCTAGCGATT GGTCAGGCGG CTCAAATCCA AACGGGTTAC
TACATTGGTA AAGGTTGGGT AAGCAGCATT CTGAAACGCG TGCAGATCTA CTTCTTGGTC
GGCTTTGCTG CATCAACGGC GGCAACGTGT TTGATTTACC TGTTCCACGA AGAGATTTTG
AGCGTGTTTA CCGATCAGCC AGAAATCTTG GCATTGGCAG GTGCCTTAGT GATGGGGTCT
ATCGTGTTAG AAGCTGGCCG CGTGTTTAAC TTGATCTTCA TCTCGGCACT GAAAGGCGCT
GGTGATATCA AGTTCCCAGT ACAGATGGGG ATTCTCAGCA TGTGGGGCCT GGGTGTGGTG
TTCTCTTACA TCTTGGTTAT TCACTTGGGC TACGGCGTGA TTGGTGCGTG GATGGCGATT
GCTTTGGATG AATGGGTACG CGGCATCATC ATGGCAAGAC GTTGGCGCTC TCAAGTATGG
ACGAAGTTTA AAGTAAGCTA A
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| Protein sequence | MPKSQNINQR MSIVALAWPI LVEILLRTAL GTSDVFMLSG YSDKAVSAVG VITQLTFFLI
IVSTFVSSGT GILIAQYNGA GREKDSVDVG VASIALSVIV GAFLSVLAVI GAVFFLPYYG
LEAQVEQYAR EYLLISGAMT FNVTIGIVFT TILRSHGYSR SPMVVNLISG VFNIIGNYIA
LYQPFGLPVY GVEGVAVATV VSQVIGTLLL GLILKRSSIE LPMSKLKQVP KDVFKKILKI
GGMNAGEVLS YNMAQICIVY FVVQMGTSSL AAFTYAQNIA RFSFAFALAI GQAAQIQTGY
YIGKGWVSSI LKRVQIYFLV GFAASTAATC LIYLFHEEIL SVFTDQPEIL ALAGALVMGS
IVLEAGRVFN LIFISALKGA GDIKFPVQMG ILSMWGLGVV FSYILVIHLG YGVIGAWMAI
ALDEWVRGII MARRWRSQVW TKFKVS
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