Gene VIBHAR_06903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06903 
Symbol 
ID5556790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp2002034 
End bp2003059 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content49% 
IMG OID640911372 
Producthistidine kinase 
Protein accessionYP_001449005 
Protein GI156978099 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG ATATCGCGAA GAAATCCACT TCGAAATCCA AACTGACCAA AATCCTTTTC 
CTTCTCGTTT GTGTTATCGC CTTCGGTGCG ATGTACTGGT CTTGGCAATA CTCTGACAGT 
CACCCAAGTA CGGAAGACGC CTACGTAAGA GCTAAAATCC TGTCTGTCGC TCCTCAGGTT 
CAAGGCCAAG TGATCTCGGT AGAAGCCAAA GATTTTCAAG TGGTGAACAA AGGCGACCTG 
CTATTAAAGA TTGATTCTCG CCCTTACCTG CTCGCAGTTA AACAAGCGAA AGCGGCTTAT 
CAATTGGCGG TGCAACAGCA CGACGTAGCC GACAAGCAAG TGACCGAAGC GGTGGCGGGA 
TTGGATGCTG CACGCTCGAA CCTGACCGAA GCGCAGTTGG AGTACAAACG TACTAACTCG 
CTAGTGAAAC GCAAATTAGC GTCTGACCAA GATTTGGATA CCGCGAAGAA CAAACTCGCG 
AACGCTCAAG CGAGTTTAGA ACAAGCACGT GCAACGGTTG AAAAAGCGAT CGCGAACCGC 
GGTGAAGAAG GTGCAGAAGC AGCGGTTGTT CAGCAAGCAG CGGCGCAACT TGCACAAGCT 
GAATTGAACC TGAGCTACAC CGACATCACT TCTCCTGTCG ATGGTATCGC GGGTGAAATC 
AACACACATA CTGGTTCTGT TGTCGGCATT GGCCAAACAC TGTTCCCTGT GATTGTAAAA 
GACAGTTACT GGGTACGCGC AAACTTTAAA GAAACTGACC TAACACACAT CAAAGCAGGC 
ATGCATGCTG AAGTCGTGAT CGACATGTAC CCAGACGTAG TTTGGGATGC GAAAGTGGAA 
GAACTGTCGC CAGCAAGTGG TACCTCTTTC TCTTTGATGC CACCAGAAAA TGCAACTGGT 
AACTGGGTGA AAATCAAACA ACGTTTCCCT GTGCGTTTGA CGCTTGAAGT ACCTGAAGGT 
GCGCCACAAT TACGTGTGGG TGCAAGCTCC GAAGTGACTG TTGATCTGAA AAGTAACGCA 
CAATGA
 
Protein sequence
MSDDIAKKST SKSKLTKILF LLVCVIAFGA MYWSWQYSDS HPSTEDAYVR AKILSVAPQV 
QGQVISVEAK DFQVVNKGDL LLKIDSRPYL LAVKQAKAAY QLAVQQHDVA DKQVTEAVAG 
LDAARSNLTE AQLEYKRTNS LVKRKLASDQ DLDTAKNKLA NAQASLEQAR ATVEKAIANR 
GEEGAEAAVV QQAAAQLAQA ELNLSYTDIT SPVDGIAGEI NTHTGSVVGI GQTLFPVIVK 
DSYWVRANFK ETDLTHIKAG MHAEVVIDMY PDVVWDAKVE ELSPASGTSF SLMPPENATG 
NWVKIKQRFP VRLTLEVPEG APQLRVGASS EVTVDLKSNA Q