Gene VIBHAR_06739 details

Gene Information

• Locus tag: VIBHAR_06739
• Symbol: emrD
• ID: 5558622
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1871641
• End bp: 1872846
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640911207
• Product: multidrug resistance protein D
• Protein accession: YP_001448849
• Protein GI: 156977943
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease
• TIGRFAM ID: [TIGR00710] drug resistance transporter, Bcr/CflA subfamily; [TIGR00880] Multidrug resistance protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCCT CGTTTCCATT AGCGAAACTT ACCTTTTTAA TCGCAATTCT GACTGCCGTA 
GGTCAAATGA CTCAAACGAT GTACGTGCCT TCTATTGGTC ATATGGCGGG TGAGTTCTTG 
GTATCAGCGT CGTCACTTCA AGCTGTGATG GCGTGTTACC TGATCCCTTA CGGTCTTTCG 
CAGTTTGTGT ACGGCACACT GTCTGATCGC CTTGGTCGCA AACCAATCAT CGTTGCGGGT 
TTGATCATTT ATATTCTTGG TACTTTGGTG GCGCTATTTG CTCATGAGTA CGAATGGTTC 
CTAGCCGGTA GCTTTATCCA AGGTTTGGGT ATCGGTTGTG GCGGTGCGAT GTCTCGCACA 
CTGACTCGTG ACTGTTTTGA AGGCGCAGAA CTGCACCGTG CAAACAGCTT GATCAGCATG 
TGTGTAATTT TCTCGCCATT GATGGCCCCT GTACTAGGCG GTTACCTAAC TGAAGCTTTC 
GGTTGGCGCT CTAGCTACTT ATTCCTTGCT CTGTTTGGTA TCGCAGTAAT GATCACCATG 
ATGACAAGCA TGATGGAAAC TTTGCCGAAA GAGCGTCGCA AACATGAATC TGTGGCGAAG 
AGCTACAAGT TCGTGCTTTC AGACAAACGC TTCCAAGGCT TCTTATTGGT GTTGGTTGCT 
ACGTTCGCAG GCGTTGCAGT ATTTGAAGCT GCAGCTGGTG TACTACTGGG CGGCGTGCTT 
GGCTTGCCAG CAACCACAGT AAGCTTACTG TTTGTCTTGC CGATTCCGGG TTACTTAGTC 
GGCGCTGGTC TATCGAGCTA CATCGCACAA CGCCGTTCTG AGCGACGTGC TCTAAACGTT 
GGTCTAGTCG CTATCTTAGT TGGCTCAGCA GTGGTATTGA TTCCGGGTCT GTTTGGTCTA 
ACAACGGCGT TGACTCTGAT TGGCGGTGCA ACCATTTACT TCTTGGGTGC GGGTATTTTG 
TTCCCAGCGG CAACAACAGG TGCACTTTCA CCGTTCCCAT ACCACGCGGG CACTGGCGGT 
GCGATTTTAG GTGGCATGCA AAACCTAGGT GCGGGTATCG CGACGCTGTT GGCTTCGTTC 
TTCCCGGCAC AAGACCAAAT GCCGCTAGGT TGTTTGATGA TGGCAATGTC GATCATCGCC 
ATGCTTGGTC TACGCTGGGT TAATCGCAAG CACGACCATT CAAACGAAAT GCCACTGGCG 
ATCTAA 

 

Protein sequence

MSASFPLAKL TFLIAILTAV GQMTQTMYVP SIGHMAGEFL VSASSLQAVM ACYLIPYGLS 
QFVYGTLSDR LGRKPIIVAG LIIYILGTLV ALFAHEYEWF LAGSFIQGLG IGCGGAMSRT 
LTRDCFEGAE LHRANSLISM CVIFSPLMAP VLGGYLTEAF GWRSSYLFLA LFGIAVMITM 
MTSMMETLPK ERRKHESVAK SYKFVLSDKR FQGFLLVLVA TFAGVAVFEA AAGVLLGGVL 
GLPATTVSLL FVLPIPGYLV GAGLSSYIAQ RRSERRALNV GLVAILVGSA VVLIPGLFGL 
TTALTLIGGA TIYFLGAGIL FPAATTGALS PFPYHAGTGG AILGGMQNLG AGIATLLASF 
FPAQDQMPLG CLMMAMSIIA MLGLRWVNRK HDHSNEMPLA I