Gene VIBHAR_06729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06729 
Symbol 
ID5558857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1862944 
End bp1863810 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content45% 
IMG OID640911197 
Producthypothetical protein 
Protein accessionYP_001448840 
Protein GI156977934 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTACA TCGAAAAAAT ACCTCAGAGA CCGGGCTTTT CTTGGCGCTA TCGTCGAATT 
GATGAGTCAA CAAAGCAGTC TGATTTACAC TTTCATGATG ATGTGTATGA GTTGGTTATT
CATCGTCACT TTGATGGAGT GTTAAATGTC GGCCATTGCG AGATGGATAT CGAACATAAT
CAGATGTTGT TGATTGCCCC TGGCGTTCCG CATTCTTTTT GCTCTACGTC TTCGAAAGAC
AATTGTGAGA CACACGTGGT TTGGTTTAAG CGTGAGTGGA TTTCCAATCT CATGTTTTAT
TGTACGGAGC TACGTAAACT GGACCCGTTA TTAAAAGCTG CCAATAAAGG TGTGGTCTTT
TCTAAGGGAA CGGCCCAACA AGTGGTGGAC TTGATGCATG AGCTGATGAA AGTCCCTGCA
ATGGAACAGC TTGCCCGTTT TATTCACGTT CTTTCTTTGC TTGCCCATGA TGAAGCCGCA
AAAACACTGA TGACGCATTC TTACCTCTCG CTGAGTGAAC ATGAGCAACA AGAAAGAGAG
CGGGTTGCTA AGGTCAATGC GTATCTTGAG CAGCACTTTG CTCGTAAAAT AACCCTTGCC
GACTTAGCGA ACGATTTATC GCTCAGTGAA AGTGCCGTGA CTCGATTATT TCAAAAGCAC
TTTAAAGAAC CTTTCAGCCA GCGCTTGATG AAGCTGCGTA TTAATCACGC TGCGGAATTG
CTGCAATCGA CTGAGTTACC GATCGGGATT GTGTTTGAGC GAGTAGGGTA TCGGAATCAA
GCTTTATTTA ATCGCCATTT CAAAACTTAC AAAGGGCTTA CCCCACGAGA TTACCGACAA
CATTACCAGC AACGCATTCA GCCCTAG
 
Protein sequence
MAYIEKIPQR PGFSWRYRRI DESTKQSDLH FHDDVYELVI HRHFDGVLNV GHCEMDIEHN 
QMLLIAPGVP HSFCSTSSKD NCETHVVWFK REWISNLMFY CTELRKLDPL LKAANKGVVF
SKGTAQQVVD LMHELMKVPA MEQLARFIHV LSLLAHDEAA KTLMTHSYLS LSEHEQQERE
RVAKVNAYLE QHFARKITLA DLANDLSLSE SAVTRLFQKH FKEPFSQRLM KLRINHAAEL
LQSTELPIGI VFERVGYRNQ ALFNRHFKTY KGLTPRDYRQ HYQQRIQP