Gene VIBHAR_06539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06539 
Symbol 
ID5557819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1692377 
End bp1693033 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID640911012 
Producthypothetical protein 
Protein accessionYP_001448657 
Protein GI156977751 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGAAG CTCATCGAAG GGCGGGAAGG CCTACAGATA AAATCGACGC ACGGGAGAAA 
CTGATTTTCC ATGCGCGCGA ACTCTTCACT ATTATGGCTT ACGACAAAGT GTCTACTCGC 
CTGGTCGCGC AGAAAGCAGG CGTGAACGTG GCGATGATTC GCTACTACTT TGGCAACAAA 
GAGGGCTTGT TCGAGACCAT GTTGCGCGAA ACCCTCTCAC CGATGCAAAA ACAGATGCAG 
GCATTGATGT CCGACAGTAA CGAGCAAAAC TTCCTCGATT TAATGCGTAC CTACTATCGC 
GAGATGATCA AAGTGCCACA GTTCCCACGT TTGATTGCTC AAGTCATGCA TATGCCTCCT 
TCAGAAACTC AACGTAAATT ACTGGAAAAA GTTTTCGCTG ACATCAGCAA ACCAATGCAA 
GGCGTGATCT TTGATAAGTT GATCGACAGT GGCGTTTTAC GAAAAGACGC TGACCCTCAA 
CTTTGTCGCG TCTCTTACAT CAGCTTAATG GTGTTTCCTT TTATGGCACC ACCAGCACTT 
CTGGCTATTC ACGGTATCGA GCTCTCAGAA GCCTTCTTGA ACCGATTATT CGAACACAAC 
ATACAACTGA TGAAACATGG ATTTTTAGAT TCGGGCGACC AATATGAAAA TGAATAA
 
Protein sequence
MTEAHRRAGR PTDKIDAREK LIFHARELFT IMAYDKVSTR LVAQKAGVNV AMIRYYFGNK 
EGLFETMLRE TLSPMQKQMQ ALMSDSNEQN FLDLMRTYYR EMIKVPQFPR LIAQVMHMPP 
SETQRKLLEK VFADISKPMQ GVIFDKLIDS GVLRKDADPQ LCRVSYISLM VFPFMAPPAL 
LAIHGIELSE AFLNRLFEHN IQLMKHGFLD SGDQYENE