| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06306 |
|---|
| Symbol | |
|---|
| ID | 5557925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 1483259 |
|---|
| End bp | 1484578 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640910779 |
|---|
| Product | peptidase |
|---|
| Protein accession | YP_001448424 |
|---|
| Protein GI | 156977518 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTG TTATAAAGGA GATAGTAATT CCCGTGTCTA CAAATGAAGT TACAACAAGA
CGGTTGCCGA ATCTGACAAG TCGTAAAGCG CTACTGTTGT ACTCCTTGCC AGTATTAGTT
GCGATTGGTG TTTCCAACTC TCTCAAAGAG TCTTCCCTTA CTAAAACCAT CGCATTGAAC
CTGCCTGAAA CGCAGGTTGT CGAAAATATT CTTGATGCGA CAACAGCAGA AGTTGTCACT
CCACCAAATT TTGAATACCA AATCCAAGCA GGTGATAACC TGAGTACCAT TTTCAGCCAA
CTAGGCTTAG GCTACAGCTC GTTGATGAAA GTGATGGAAA CGGATTTGAA CTTCCTTGCT
CTTGATACCT TGAAACCTGG TAACACACTG CGTTTTTGGC GCAATGAATC TACGGGCGAA
CTTGAAAAAA TGGAACTGCA ATTCTCTATT GCAGATAAAG TGGTTTACCA TCGTAATGAC
GATGGCAGCT ACGATTTCTC AGACATCTCA ATTCCTGGTG TTTGGACGCA AGAGCCTTTG
GTCGGTGTTA TTCGAGGTAG CTTCTCGTCA TCCGCAAATC GTTTGGGCTT GAGCTCAGCA
GAAATCAGTC AAGTGGTTAA CTTACTTAAA GAGCAAGTGA ACTTCGGCAA AGATTTACGC
GCTGGTGACC GGTTTGAAGT GGTTCGCCGC TCTCAAAGTA TTGATGGTGT GCCAACTGGC
AAGAACGAAA TAGAAGCAAT CAAAATTTAT AACCGTGGTC GTGAAGTCAC CGCTTACCTT
CACACTGACG GTCAATTCTA CAATGCGAAA GGTGAGAGCC TTCAGCGTGC TTTCCAACGT
TACCCTGTTA GCCGAGGCTG GCGCATCAGT TCTGGATTCA ACCCTAAACG TCTTCACCCT
GTAACGGGCC GTGTAGCACC ACATAACGGA ACAGACTGGG CGGTACCGAC AGGAACACCT
GTAGAGGCAA CGGGTGATGG TACCGTGATC ATGACTCGCA AACACCCGTA CGCAGGTAAC
TATGTGGTGA TTGAGCATGG TAGTAAGTAC AAAACTCGTT ACTTACACTT AAGTAAGATC
TTAGTGAAGA AAGGGCAGAA GGTCTCTCGT GGTCAACGCA TTGGCTTGTC AGGTAAGACT
GGCCGTGTGA CTGGTCCGCA CCTTCACTAC GAGTTGATCG AATACGGCCG TCCGGTGAAC
GCAATGCGCG CGAAGATCCC AATGGCAAGC TCAGTGCCTA AGAAAGAAAT GGCGAGCTTC
ATTACGAACC GTAATGAAAT GGACAAGCTG TTAAAAGATA AAGAAAAAGC CGTTCTATAA
|
|---|
| Protein sequence | MSLVIKEIVI PVSTNEVTTR RLPNLTSRKA LLLYSLPVLV AIGVSNSLKE SSLTKTIALN
LPETQVVENI LDATTAEVVT PPNFEYQIQA GDNLSTIFSQ LGLGYSSLMK VMETDLNFLA
LDTLKPGNTL RFWRNESTGE LEKMELQFSI ADKVVYHRND DGSYDFSDIS IPGVWTQEPL
VGVIRGSFSS SANRLGLSSA EISQVVNLLK EQVNFGKDLR AGDRFEVVRR SQSIDGVPTG
KNEIEAIKIY NRGREVTAYL HTDGQFYNAK GESLQRAFQR YPVSRGWRIS SGFNPKRLHP
VTGRVAPHNG TDWAVPTGTP VEATGDGTVI MTRKHPYAGN YVVIEHGSKY KTRYLHLSKI
LVKKGQKVSR GQRIGLSGKT GRVTGPHLHY ELIEYGRPVN AMRAKIPMAS SVPKKEMASF
ITNRNEMDKL LKDKEKAVL
|
|---|
| |