Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06299 |
Symbol | |
ID | 5558766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1476032 |
End bp | 1478179 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640910773 |
Product | hypothetical protein |
Protein accession | YP_001448418 |
Protein GI | 156977512 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTC ACGTTCGTTT TAAGTATTCA TCACTGGCAG TTGCGTTGTT GACTGCATTT TCCACGCAGG TTTTAGCAGA AGAAGCTATT ACAGCGACAG ATTCGAATAT AGAAACTATC ACTGTTTTAG GGAAAGCTTA TCGTAATACA GCGACTAAGT CGGCACTTGA GCCAGAAGAA ACGCCTCAAG GTATTACCGT TATTGATGAA GAGCAGTTAG AACAACGAGG TGTTAAGTCC CTCAACCAAG CGCTCAGATA TGCTCCGGGT GTTGTAACTG AACAGAAGGG CGCATCAGTA ACCATGTACG ATACGTTTTC TATTCGTGGT TTTAGTAACA ACCAAAGCTA TTACGATGGT TTAGTGCTTC CGTTCCTAAC CGGTTGGAAT CTACAACCTC AGATAGATCC TATTGCGATT CAGCAAGTTG AAGTATTTAA GGGTCCTACA TCTGTGTTGT ATGGAGCGAT GCCACCAGGC GGTATGGTCA ACATGATTGC GAAGACACCG CAAGAAGATG GGTCGACGAA AGTTGGTGTA TCTACAGGTT CAAGGAACCT TATGGAAGCG TCAATTGATA CTACAGGTCA ATTAGGTGAC AGTGATTTTT CTTATCGCTT TTTAGCACTT GCCCGTAAAC AAGACAGCCA AGTAGTTCAC GCAGAAGAAG AGCGCTATGT GATTGCTCCT TCACTAGATT GGCAGTTGTC TGATAGAACA CTTATCAACT TCAACCTTTA CTATCAGAAC GATCCATCAA TGGGTACTAA CTCTGCTATG CCATTAGAAG TGCTGAAGGC GAGTGATCCA TCTGTGTCCA TGGGTGACAA GAATTGGAGT ACCTTTGAAC GTGAAGTCTT GATGCTAGGC TATAAGATCA ATCACCAAAT TAACGATGAT TGGACTTTCC TGCAGAATGC TCGCTATACC GATGCGTCTC TGTACCAAGA GAATACTTAC CACACCGCGA CTAACTTCAA TCCTGTGACG GGCAGTTTAA TCCGAAATGT TTACAGTACA GATGAGGATT CACAGAGCTT TGTTATCGAT AACCAAGTTT CAGGTCGTGT CGAAATTGGT GGTTTAGAAC ACAATTTATT ATTCGGTGTC GACTACCTAA AGCTAACAGG TGATTCTCTG TACAAAGAAT TTACTGCGAA TGCGAGTTTC TATGGGTTTG ATGCTTATAA TCCGAACAAT GACCTTTTGG ATAGAAGTCA GCTTCAAGAA AACTACCGTG AATCTCATGA TATTACGACC GAACAGTTAG GTTTGTACTT CCAAGATCAA GTTCGTTATG ACGCATTGGT TTTATTAGCT GGTGGACGTT ATGACATGTT TAAGGCAAGC GATGACAAAA ATAGTTCTTA CCCAACTTAT GATGGAAAAG ATGAAGCTGA TCACAACCAG TTCTCGTACC GTGTAGGTGC TTTGTATGAG CTAGATAATG GTATTTCTCC TTTTGTAAGT TACGCGACGA GCTTTGAGCC AGCTGCTGGT ACTGATATTA ACGGCAACTC TTTAAAACCT CAGCTAGGTG AACAGATCGA GTTGGGTATT AAATACTTGT CTCCAGATAT GTCACAGCAG GTTACTGCTT CTTACTTCCA TATCACTAAG AAAGACTCAA TTGCTGCAGA TCCATCAGAT CCTACATACC GTTCTAAGAT TCAGCTAGGT GAGGTGCGCT CGCAAGGTAT GGAGCTTGAG GGCAGATGGT TTGTAACTGA AGATTGGGAT GTTAATGCGA GCTACACGTA TATCGACATG GAAGTGACGG AAGATGCGAA TCCAGATCTA GAAGGCACTA CACCAATCTA TGTACCGACA CATGCCGCTA ACCTATGGAG CAATTACTAT GTCTATGGTG GTGCTTTATC GGGAACCCGC TTCAGTGTAG GTGCTCGTTA CACTGGTGAA ATGGAGATGG ATGCAACGAA TACTCAAGGC AAAGTGCCTT CTTACACAGT CGTCGATCTT TCAGTAGGTT ATGACTTAGG TGAGGCAAGC GACACACTAT CTGGTGCAAC AGCTAACTTG CTAGTGAACA ACCTATTCGA TGAAGAGTAC TACACCTGTT ACGACCGTTC TAACTGCTGG TTTGGTGCAG AGCAATCTGT AGAGCTTAGT GTGAACTATG AGTTCTAA
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Protein sequence | MTTHVRFKYS SLAVALLTAF STQVLAEEAI TATDSNIETI TVLGKAYRNT ATKSALEPEE TPQGITVIDE EQLEQRGVKS LNQALRYAPG VVTEQKGASV TMYDTFSIRG FSNNQSYYDG LVLPFLTGWN LQPQIDPIAI QQVEVFKGPT SVLYGAMPPG GMVNMIAKTP QEDGSTKVGV STGSRNLMEA SIDTTGQLGD SDFSYRFLAL ARKQDSQVVH AEEERYVIAP SLDWQLSDRT LINFNLYYQN DPSMGTNSAM PLEVLKASDP SVSMGDKNWS TFEREVLMLG YKINHQINDD WTFLQNARYT DASLYQENTY HTATNFNPVT GSLIRNVYST DEDSQSFVID NQVSGRVEIG GLEHNLLFGV DYLKLTGDSL YKEFTANASF YGFDAYNPNN DLLDRSQLQE NYRESHDITT EQLGLYFQDQ VRYDALVLLA GGRYDMFKAS DDKNSSYPTY DGKDEADHNQ FSYRVGALYE LDNGISPFVS YATSFEPAAG TDINGNSLKP QLGEQIELGI KYLSPDMSQQ VTASYFHITK KDSIAADPSD PTYRSKIQLG EVRSQGMELE GRWFVTEDWD VNASYTYIDM EVTEDANPDL EGTTPIYVPT HAANLWSNYY VYGGALSGTR FSVGARYTGE MEMDATNTQG KVPSYTVVDL SVGYDLGEAS DTLSGATANL LVNNLFDEEY YTCYDRSNCW FGAEQSVELS VNYEF
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