Gene VIBHAR_06279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06279 
Symbol 
ID5558669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1459688 
End bp1460515 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content47% 
IMG OID640910753 
Producthypothetical protein 
Protein accessionYP_001448398 
Protein GI156977492 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AGAATAAGGA AGTTGCGACG TTTAAAATTG CCCAAGAGCT GGGGGGTTTA 
GAGCTGCTCG AGGCTAAATA TGAAAAGCAA AACTTCTCTC GCCATAGTCA TGAGGGCTAT
ACCATTGGTG TGATTGAAAA AGGCGCACAA CAATTCTTTC GTACTGGCGG CAACCATATT
GCGCCGCAAG ACAGCATCAT TCTTGTCAAC GCAGACGAGA TACATAATGG TCACTCAGCG
TCAGAAGGAG GCTGGGAATA TAAAGCCATG TACCCCGTAC CGGAGCAGTT TCAAACGCTC
GGGGAGGAAC TTGGAGCACC CAATGTAGCT TTGCCCTACT TCCCGCAGCC CGTCGTTTAC
GATCCGGAAC TCGCTAACCA ATTACGGTTG GTGTTCGATA CGCTGGAGAA GTCAGATAAC
CGCTTACTGC GAGAAACGCT TGTCTACGGC ACACTGATCA AACTAGCAAG CAAACACAGT
ACACATCGAG CCTCGCTTCA AGATGTAACC AAAGCGCAAA GGCAGGTGCA TCTGGTCAAA
GAGTTTCTTG AAGACTTTCC TCAAACCGAT GTTTCTTTGG AAGAGCTAGC AAAGCTCGCA
GGATTGAGTC CTTTCCATTT GTTGCGTGAG TTTCAAAAAC AGTTCGGCTT TCCGCCGCAC
GCATTTCAGA TTCAGCAAAG ACTGAGAATG GCGAAAAAAC TGCTCAAGCT GGGGCAAAAG
ATTTCTGATG TTGCTCAAGA ATGTGGCTTT CATGATCAGA GCCATTTGCA TCGTCACTTT
AAAAAAACCA TGGGCGTAAC ACCTGGGCAG TACATCAAGC ATTGTTAG
 
Protein sequence
MKEKNKEVAT FKIAQELGGL ELLEAKYEKQ NFSRHSHEGY TIGVIEKGAQ QFFRTGGNHI 
APQDSIILVN ADEIHNGHSA SEGGWEYKAM YPVPEQFQTL GEELGAPNVA LPYFPQPVVY
DPELANQLRL VFDTLEKSDN RLLRETLVYG TLIKLASKHS THRASLQDVT KAQRQVHLVK
EFLEDFPQTD VSLEELAKLA GLSPFHLLRE FQKQFGFPPH AFQIQQRLRM AKKLLKLGQK
ISDVAQECGF HDQSHLHRHF KKTMGVTPGQ YIKHC