| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06258 |
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| Symbol | |
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| ID | 5558356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1439389 |
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| End bp | 1440951 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640910732 |
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| Product | hypothetical protein |
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| Protein accession | YP_001448377 |
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| Protein GI | 156977471 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCCT TAACTTCCAA TAAAGCTCAA GAAACTCTCG TAGGAGATTC TGACGAACTG
GTCTCCACTA CCGATCTCAA AGGTGTTATC ACTTATTGCA ATGATGCATT TTGCAGAATC
GCTGAATACA GTCACGATGA ACTGCTCGGA CAAAACCACA ATGTCGTACG CCATGGTGAC
ATGCCTAAAG CGGCATTCGG TGATATGTGG ACTCGTCTAA AACAAGGCAA AGCGTGGCGC
GGAATTGTAA AAAATAGCAC GAAGTCGGGT GGATATTACT GGGTGGATGC TTATGTAACG
CCCATTTATG AAGGCCACCA AGTTGTGGGA TATCAGTCGG TTCGTGTAAA GCCAAAGCGA
GAGTGGGTGG ACATTGCTTC TCAAGCATAT CAGGGCTTAT TGAAGGCTGA AAAATCTGGC
CGTGCTTGGA CCTTGAAACT GAGTGATACG TTGCGTTATG CGATTCTACT TGGTGCGCTT
GCGGCACCAA CAGCTGGCTT CGCTTTTTCA CTTGAAGGAC CTTTGGCTTG GCTTGCGACA
TTGCTCCCGG CTGGGGTGCT CGCAATGTTG TTCCGCCAAG AGCTTATTGA TACACCACTG
CAATTTAAAA AGCTGCAAAC CCAATACGAT AGCGTGAGTC GTTTAGTGTA TTCAGGTAAT
AAACCGTTCT CGATTGCAGA TTTTCATATA AAGATGCTCT CTGCTCGTAT TCGTACTGTC
CTTGGACGTA TGACAGATTC AGCTGTGCCA TTACAAAACT GTGCTGAAGA GTTGAGTCAC
ACAACGGCAG AAGTCTTGTC TGCACTGACT CAGCAAAACA ACGATATTCA CGAGGTTCGT
GACGCGGCCG ATTCAATGGA AGCATCTGCC AATTCAGTAT CATCTAGTTC TCATGAAGCC
CATGTATTGA TTGATGACAC TTTGAAATCT TGTTTGATGG CGAAAGACAC GATTGATCAA
ACTCATACTA ACCTAGCGCA GCTTAGTTTA CAGGCGGAGA AAGCCACAGA GACGACTTAT
CAACTGAGTG ATCAAGCGCA GAAGGTAAGT CAATTAATGG AGGAGATAGG TGGTATTGCC
GATCAAACGA ATCTGCTAGC GCTTAATGCA GCAATTGAAG CAGCACGAGC GGGTGAACAA
GGTCGCGGCT TCGCTGTGGT TGCCGATGAA GTGAGAGCGC TATCTGGACG GACTTCGAAT
GCAACTGAGC AAATTAAAGC ATCCATTGAA ACCATGTTGA TGACGATTCA GGGCTGGCAG
AAAGACATTA TCGCTAACAA AGATCAAACG GATACATGCT CACAAGTTGC AGAGCAAAGT
GCGTTGCGTT TGTCGGAAGT AGAGCAGATG ATGCAAACCA TGAATGGGTT GATGGTGAAT
GTCGCGGATT CTGCCAATAA GCAACTGCAA CTGTCTAGCA ATGTGAATCA ACACATTCAT
TCGATTGCTT CTACCGCAGA GCAGAACTTG GCCGCGACAT ATTCTGTAGA GCAAAACAGT
AAGCAGTTAA AAGAGCAGGT TCAAGACTTC TACCGACTTG CGAATCAGTT TGAAGAGAAG
TGA
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| Protein sequence | MSALTSNKAQ ETLVGDSDEL VSTTDLKGVI TYCNDAFCRI AEYSHDELLG QNHNVVRHGD
MPKAAFGDMW TRLKQGKAWR GIVKNSTKSG GYYWVDAYVT PIYEGHQVVG YQSVRVKPKR
EWVDIASQAY QGLLKAEKSG RAWTLKLSDT LRYAILLGAL AAPTAGFAFS LEGPLAWLAT
LLPAGVLAML FRQELIDTPL QFKKLQTQYD SVSRLVYSGN KPFSIADFHI KMLSARIRTV
LGRMTDSAVP LQNCAEELSH TTAEVLSALT QQNNDIHEVR DAADSMEASA NSVSSSSHEA
HVLIDDTLKS CLMAKDTIDQ THTNLAQLSL QAEKATETTY QLSDQAQKVS QLMEEIGGIA
DQTNLLALNA AIEAARAGEQ GRGFAVVADE VRALSGRTSN ATEQIKASIE TMLMTIQGWQ
KDIIANKDQT DTCSQVAEQS ALRLSEVEQM MQTMNGLMVN VADSANKQLQ LSSNVNQHIH
SIASTAEQNL AATYSVEQNS KQLKEQVQDF YRLANQFEEK
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