| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06114 |
|---|
| Symbol | |
|---|
| ID | 5556758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 1275614 |
|---|
| End bp | 1277086 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640910588 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001448234 |
|---|
| Protein GI | 156977328 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTTA CGGTGTCCGC TTCAACCGTA TTTAAGTTAA GCCCACTTAC CATCGCCCTT
TTCGTCGCTT CCCAAGTGAC TTACGCCAAC GATGACATGG AAGTGATGGA GGTGCTAGGC
CACACTCCGG AAGGAATCGA TATTACGATT GACTCCGATC AGCTCGCCAA ATCACAGGCA
CAAGATCTGA ATGACATTTT CCGTAAAGAT GCAGAAATTA GTGTTGGTGG CTCTTCTGGT
GTTTCTCAAA AGATCTATGT CCGTGGTCTG GAAGATACCA TGTTGAATGT GTCTATCGAC
GGCGCGGCAC AATCCGGTAA CCTATTCCAT CACCAAGGTC GATTATCTAT CGAGCCTGAA
CTGCTCAAGC AAGTTGATGT TAGCGCGGGA GCAGGACGAG CAACAGATGG CCCAGGAGCA
TTGGGTGGCG CTATAAAGTT CACCACTAAA GACGCACATG ACCTCCTTAC TGCAGGTGAA
ACCTACGGCG CTATGCTCAA AGGCGGTTAC TACACCAATA ATGAAGGTTA CAAAGTTTCG
GCAAGTTTGT ATGGAGAAGT CGCCGATCAG CTTGGCCTAC TTGCATCATT TGGTTACGTC
GACGGGGATA ACATCGAAGA CGGCAAAGGC CAGGAGCAGC CGTACACTGC GTTAGAACAG
CAAGTTGCGA TCCTTAAGCT ATCCGGTCAA CTCAACGACG AACACTACCT CTCGGTAAGC
TACGACTATC GTAATGATGA TGGCCGTCGC TTAAATCGCC CCCACTTCCA ACCAAGCTTT
AAAAATGCGC CTCTCGATCA AGAAACCGAT CGTTCTACTT TTACGCTTAA CCACAAATAC
AACGCAAGCG ACCTTTTCAA TCTCGACACC ACTTTCTACT ACACCGATAG CCGCTTAGCT
CATAAAGATC ACCCTCGCTG GGGCACCAGT GATGGCTCAA TTCAAACGTC CGGCGTAAAG
ATCTTCAATA CGAGCAAATT AACAGGCCAT ACCTTGGTTT ACGGTTTGGA TTACAAGAAA
GACAAATCTG AGTTTGAAAC CAACTACGAT GGTAAAAAAA ACGATGAGGA GAAAGGCACC
GTTTACGGCT TGTTTGTTCA AGATGATTGG ATGCTAACAG AAACCATCAT TCTTACCGCT
GGTGCTCGTT ATGACTGGTA TGAGCTTACT GATAACATGG AGCAAGACTT CGATTCGAGC
GGCTTTAGCC CTAACGTGGG TATTAATTAC AATCCGTTGG AAGGTTTGAA CCTATTTGCT
AGTTATGCAG AAGCGTTTCG TGGCCAACAA ATCAAAGAAC TGTTTGTCAT CGACTACCGC
GAAAACGACC CAAATCGTAA GCCTGAAGAA GCACGTAACT TAGAGCTAGG GGCAAATTAC
CAATACGATG ATTTCTTCGC TGGCATCACA TTCTTTGATA GTACAATCAA AGACGTGGTA
ACAAACCAAG GCCTGAGGGC TCCCCACAAC TAG
|
|---|
| Protein sequence | MEVTVSASTV FKLSPLTIAL FVASQVTYAN DDMEVMEVLG HTPEGIDITI DSDQLAKSQA
QDLNDIFRKD AEISVGGSSG VSQKIYVRGL EDTMLNVSID GAAQSGNLFH HQGRLSIEPE
LLKQVDVSAG AGRATDGPGA LGGAIKFTTK DAHDLLTAGE TYGAMLKGGY YTNNEGYKVS
ASLYGEVADQ LGLLASFGYV DGDNIEDGKG QEQPYTALEQ QVAILKLSGQ LNDEHYLSVS
YDYRNDDGRR LNRPHFQPSF KNAPLDQETD RSTFTLNHKY NASDLFNLDT TFYYTDSRLA
HKDHPRWGTS DGSIQTSGVK IFNTSKLTGH TLVYGLDYKK DKSEFETNYD GKKNDEEKGT
VYGLFVQDDW MLTETIILTA GARYDWYELT DNMEQDFDSS GFSPNVGINY NPLEGLNLFA
SYAEAFRGQQ IKELFVIDYR ENDPNRKPEE ARNLELGANY QYDDFFAGIT FFDSTIKDVV
TNQGLRAPHN
|
|---|
| |