Gene VIBHAR_06087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06087 
SymbolrbgA 
ID5556963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1249513 
End bp1250457 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content46% 
IMG OID640910561 
Productribosomal biogenesis GTPase 
Protein accessionYP_001448207 
Protein GI156977301 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR03596] ribosome biogenesis GTP-binding protein YlqF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAACA ACTCTATCCA GTGGTTTCCG GGCCACATGC ATAAAGCCCA AAAAGAGATT 
GCTGAAGCGA TCCCTCAAAT AGATGTCATT ATTGAAGTGC TTGATGCTCG TATCCCTTTT
AGTAGTGAAA ACCCTATGAT CGCGGAGCTC AAGGGCGATA AGCCAGTAGT AAAAGTGCTT
AACAAACGCG ATCTTGCGGA TCCGGAGTTG ACTCAAGTTT GGATTGACCA CTTCGAGAAA
GAGCACAACG TAAAAGCGAT TGCCATTACT ACTTCTCAAC AGTCAGAAGT CCAAAAAATT
ATGGAGTTAG TACGTAAGCT TGCTCCGCAT CGCGAAGAAA TTGGCAAGAA CATTCGTACC
ATGATCATGG GTATTCCAAA CGTTGGTAAA TCCACCATTA TCAATGCTTT GGCAGGCCGA
ACTATCGCTG TGACAGGTAA CCAACCAGCG GTTACACGTC GCCAGCAACG CATTAACCTT
CAAAATGGCA TTGTACTTTC AGATACTCCT GGGATTCTTT GGCCAAAAGT AGAAAACCCG
CACAGCGGCT TCCGTCTTGC TGCAACTGGC GCAGTAAAAG ACACGGCAAT GGAATACGAC
GAAGTGGCAT TTTACACAGT CGAATACCTA GCCGCTCACT ACCCGGAGAA GTTGAAAGAG
CGCTACCAAA TCGATGAACT TCCAGAATCG GATATTGAGA TCATGGAAGA GATTGGTCGT
CGTCGTGGTG CACTTCGTGC TGGCGGTCGT GTAGACCTTC ACAAAGTATC AGAGATCCTT
CTTCATGAAC TTCGCCAAGG CACCTTGGGC CAGATTACTC TAGAGCTTCC TGAGATGATT
ACTCAAGAGC TAATTGAGGT AGAAATCGAA ACCGCTCGTA AGGAAGAAGA GAAAGCGAAA
CGCAAAGAGG AACGTCGTAA ACGTTATCTT CGCAACAAAC GATAA
 
Protein sequence
MVNNSIQWFP GHMHKAQKEI AEAIPQIDVI IEVLDARIPF SSENPMIAEL KGDKPVVKVL 
NKRDLADPEL TQVWIDHFEK EHNVKAIAIT TSQQSEVQKI MELVRKLAPH REEIGKNIRT
MIMGIPNVGK STIINALAGR TIAVTGNQPA VTRRQQRINL QNGIVLSDTP GILWPKVENP
HSGFRLAATG AVKDTAMEYD EVAFYTVEYL AAHYPEKLKE RYQIDELPES DIEIMEEIGR
RRGALRAGGR VDLHKVSEIL LHELRQGTLG QITLELPEMI TQELIEVEIE TARKEEEKAK
RKEERRKRYL RNKR