Gene VIBHAR_06009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06009 
Symbol 
ID5557796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1195041 
End bp1196012 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content48% 
IMG OID640910483 
ProductABC-type Fe3+-siderophore transporter permease 
Protein accessionYP_001448129 
Protein GI156977223 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA CAAAAGCAAT TACGTTAACC ATTTTATTAA TTGCTTGTGC GATAGGCAGC 
TTATTCGTCG GTAGTGTCTC CCTTTCCTTA AGTGACGTGG TAACTACATT ACTTCACGGT 
GGTGACTTCG ATTTCATTAT TAATCAATAC CGACTGCCAC GTTTTATCTT AGCGATTGGC 
GTTGGTGCTG GACTCGGGCT CTCTGGAGCA TTGATCCAAG GAGTCTTGAG AAACCCTCTC 
GCCTCACCAG ATTTAATGGG TATCAGCGCG GGTACTGGTT TTGCTGCAAC CTTGCTGCTT 
GTTTATGTGC CAGACGCATC ATTGCCGTTG CTTGCCTCTG TTGCCATTTC CGGAGGAGTT 
ACCGCCGCGC TTGGTATTAT TGGTATCAGC TATAAATACA ACCCCACCCC AGCAAGGCTC 
GCATTGATTG GCATTGCAAT CAGCACCTTC ATTTCTAGCG GTATCGATTT TCTGCTGATT 
GTTAACCCGG TAGAAATTAA TACGGCAATG GTCTGGTTAA CCGGAAGCTT ATGGGGGCGT 
AACTGGTCAC AAGTGCCATT GATTTGGATA TCACTGGCCA TCTTACTGCC TCTTGCGTTG 
CGACTGGCTT GGAAACTCGA CTTAATGGGG CTTGGGGAAG AAGCCGCCAC CACAATAGGT 
GCTCAACCAG AGCGCACACG CTTTATCGCA TTGGTTCTTT CCGTTCTCCT TGCCAGTATT 
AGCGTTGCAG TATGTGGGAC GATCAGCTTC GTGGGCTTGC TATCTCCTCA TTTAGCTCGC 
TTATTGTTTG GACACAATCA CAAGTACTTG CTCCCTATGT CTGGTGTGAT TGGGGCTTTA 
CTTGTGGTTG TCGCAGACGC CGCCGCTCGT GGTATTGCTC CCCCACTTGA ACTTCCGGCT 
GGAGTACTGA CTTCGCTCAT TGGTGCACCT TACTTCATCT TCTTACTTCA ACGCTATAAA 
GGTTGGAAAT AA
 
Protein sequence
MNKTKAITLT ILLIACAIGS LFVGSVSLSL SDVVTTLLHG GDFDFIINQY RLPRFILAIG 
VGAGLGLSGA LIQGVLRNPL ASPDLMGISA GTGFAATLLL VYVPDASLPL LASVAISGGV 
TAALGIIGIS YKYNPTPARL ALIGIAISTF ISSGIDFLLI VNPVEINTAM VWLTGSLWGR 
NWSQVPLIWI SLAILLPLAL RLAWKLDLMG LGEEAATTIG AQPERTRFIA LVLSVLLASI 
SVAVCGTISF VGLLSPHLAR LLFGHNHKYL LPMSGVIGAL LVVVADAAAR GIAPPLELPA 
GVLTSLIGAP YFIFLLQRYK GWK