Gene VIBHAR_05954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05954 
Symbol 
ID5558862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1141085 
End bp1141903 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content45% 
IMG OID640910428 
Producthypothetical protein 
Protein accessionYP_001448074 
Protein GI156977168 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA AGAAGCAGTC CGATTACGAG CAGTACATAA GGCAGGACAG CCTTGGCGAA 
TACTACGTTG TAGTCAATCA ATACACTTTT CACAGTGTTT ATCAGCCTAT CTTTGATAAA
CATCAGAAAA TGATCGGTAT GGAAGCCCTG CTGCGCATTC GTGGTGCAGA TGGTGCCTAT
ATTCGTCCCG ATCTTTTCTT TACTGATAGC AGCATTGATA CCCACTTTCG ACTTTGCGTA
GAGTTCCTAT CTCGAGCAAT TCACATCCGC AACTTCGCTC GTCACTTTGC GGGCTCGCCG
ATCAAATTGT TTCTCAACGT AATGCCCCAA ACGTTGTTAA CACTTACCAA TGATATGGGC
TTTAAAGATA ACGGATTACT CTATAAGCGA TTATCCGAAT TGGGTATGGC ACCTTCTGAT
GTCGTCTTTG AAGTTGTAGA AGAAGCCTGT GGCGATACAG AGCTTTTGAG CCAAGCCGTA
AAACTTATGC GCGCCAATGG CTTCTTGTTT GCGATTGATG ACTTTGGCTC TCACCATTCT
GATATGCCAC GAGTGAAGCA GCTTTGCCCT GATATCATCA AGATCGACCG CTCTTACCTA
CTCGACTATT GCTCTGGTGA TACACTCGCG ATAGCCAATG CAGTCGAACT CGCCGATCAG
ATGAACGCTA AAGTCGTGAT TGAAGGCGTA GAAGAAAACG GCCAGCTATC CGCAATGCAG
GCACTGGACT TGGATTACTA CCAAGGTTTT TATCTGGCGA AACCAAACTC GATTCACCAT
TGGACTGAGC AAAAAGCTCC AGCTAAGGTA TTGCATTAA
 
Protein sequence
MELKKQSDYE QYIRQDSLGE YYVVVNQYTF HSVYQPIFDK HQKMIGMEAL LRIRGADGAY 
IRPDLFFTDS SIDTHFRLCV EFLSRAIHIR NFARHFAGSP IKLFLNVMPQ TLLTLTNDMG
FKDNGLLYKR LSELGMAPSD VVFEVVEEAC GDTELLSQAV KLMRANGFLF AIDDFGSHHS
DMPRVKQLCP DIIKIDRSYL LDYCSGDTLA IANAVELADQ MNAKVVIEGV EENGQLSAMQ
ALDLDYYQGF YLAKPNSIHH WTEQKAPAKV LH