Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05954 |
Symbol | |
ID | 5558862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1141085 |
End bp | 1141903 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640910428 |
Product | hypothetical protein |
Protein accession | YP_001448074 |
Protein GI | 156977168 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTAA AGAAGCAGTC CGATTACGAG CAGTACATAA GGCAGGACAG CCTTGGCGAA TACTACGTTG TAGTCAATCA ATACACTTTT CACAGTGTTT ATCAGCCTAT CTTTGATAAA CATCAGAAAA TGATCGGTAT GGAAGCCCTG CTGCGCATTC GTGGTGCAGA TGGTGCCTAT ATTCGTCCCG ATCTTTTCTT TACTGATAGC AGCATTGATA CCCACTTTCG ACTTTGCGTA GAGTTCCTAT CTCGAGCAAT TCACATCCGC AACTTCGCTC GTCACTTTGC GGGCTCGCCG ATCAAATTGT TTCTCAACGT AATGCCCCAA ACGTTGTTAA CACTTACCAA TGATATGGGC TTTAAAGATA ACGGATTACT CTATAAGCGA TTATCCGAAT TGGGTATGGC ACCTTCTGAT GTCGTCTTTG AAGTTGTAGA AGAAGCCTGT GGCGATACAG AGCTTTTGAG CCAAGCCGTA AAACTTATGC GCGCCAATGG CTTCTTGTTT GCGATTGATG ACTTTGGCTC TCACCATTCT GATATGCCAC GAGTGAAGCA GCTTTGCCCT GATATCATCA AGATCGACCG CTCTTACCTA CTCGACTATT GCTCTGGTGA TACACTCGCG ATAGCCAATG CAGTCGAACT CGCCGATCAG ATGAACGCTA AAGTCGTGAT TGAAGGCGTA GAAGAAAACG GCCAGCTATC CGCAATGCAG GCACTGGACT TGGATTACTA CCAAGGTTTT TATCTGGCGA AACCAAACTC GATTCACCAT TGGACTGAGC AAAAAGCTCC AGCTAAGGTA TTGCATTAA
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Protein sequence | MELKKQSDYE QYIRQDSLGE YYVVVNQYTF HSVYQPIFDK HQKMIGMEAL LRIRGADGAY IRPDLFFTDS SIDTHFRLCV EFLSRAIHIR NFARHFAGSP IKLFLNVMPQ TLLTLTNDMG FKDNGLLYKR LSELGMAPSD VVFEVVEEAC GDTELLSQAV KLMRANGFLF AIDDFGSHHS DMPRVKQLCP DIIKIDRSYL LDYCSGDTLA IANAVELADQ MNAKVVIEGV EENGQLSAMQ ALDLDYYQGF YLAKPNSIHH WTEQKAPAKV LH
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