Gene VIBHAR_05863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05863 
Symbol 
ID5557687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1051056 
End bp1051562 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content48% 
IMG OID640910337 
Producthypothetical protein 
Protein accessionYP_001447984 
Protein GI156977078 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTG ACGGCTCGGT GGCTCCTAAA GAGCGAATTA ATATCCGTTA TGTTCCAGCA 
ACTGGTGATA CGCAAGACGA CGTAGAACTG CCGCTGAGCA TGATGGTGGT TGGTGACTTT 
ACTGCACGTG CAGATGAGAC GCCTATCGAA GAACGTACTC CAATCAATAT CGACAAAGAC 
AACTTTAACG AAGTGCTAGA AGGCATGTCT CCAAACGTTA AAGTGAACGT TGAAAACCGC 
CTTTCTGACG AAGAAGGCGG CCAAATCGGT GTTGATCTAA CGTTCCAAAA CATGAAGGAC 
TTCTCTCCTG AAGCGATCGC GAAAAGCGTA CCTGAGCTAA ACAGCTTGCT TGAGCTTCGC 
GAAGCGTTGG TTGCACTGAA AGGCCCTCTA GGTAACGTTC CTGCGTTCCG TAAGAAGATC 
GCATCGGTTC TTCAAGACGA AGAAGCGAGA AAGAAACTGT TGGATGAACT AAGCATTGGC 
GACGACCAAG AAGCGAAAGA AGAGTAA
 
Protein sequence
MSRDGSVAPK ERINIRYVPA TGDTQDDVEL PLSMMVVGDF TARADETPIE ERTPINIDKD 
NFNEVLEGMS PNVKVNVENR LSDEEGGQIG VDLTFQNMKD FSPEAIAKSV PELNSLLELR 
EALVALKGPL GNVPAFRKKI ASVLQDEEAR KKLLDELSIG DDQEAKEE