Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05862 |
Symbol | |
ID | 5557686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1049572 |
End bp | 1051047 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910336 |
Product | hypothetical protein |
Protein accession | YP_001447983 |
Protein GI | 156977077 |
COG category | [S] Function unknown |
COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGCAG AAGCACAAGC TCCAGAACAA GAAGCAGCCT TAGTTGAATC AGGCTCACTT CTGGATAGCA TTCTTAACGA AACTCGTTTA AAGCCAAGTG ATGAAGGTTT TGACGTTGCA AAACGCGGCG TAGAAGCGTT CATCAGTGAG CTACTAAGCA GCTCGAACAC AGAGAAAGTA GACCAATCTT TGGTTGACCT AATGATCTCT GAAATCGATC AAAAACTGTC TAAGCAAGTT GATGCGATTC TTCACAGCGA AGAAGTTCAA GCGATTGAGT CAACGTGGCT TGGTCTTAAG TACCTTGTTG AACACACTGA CTTCCGTGAG AACATTCAAA TTGAACTGAT TTCTGCGAAG AAAGATGAAG TACTTGATGA CTTCGAAGAC GCTCCAGAAG TGGTGAAGTC TGGCCTTTAC AAACAGATCT ACACACGTGA ATACGGTCAA TTTGGTGGTA AACCAGTTGG TGCTGTTATC TGTGATTTCG CGATGTCAGC GTCCTCTCCA GATATTAAGT TGATGGAATA CATGGCGAAC GTGGGTGCAA TGTCTCATGC ACCTTTCATC ACGTCTGCTT CGGCTAAGTT CTTTGGTCTA GATAGCTACG AAGAGCTACC AAACCTGAAA GACCTTAAGT CAGTATTCGA AGGCCCACAA TACGCGAAAT GGCGCGGCCT ACGTGAACAC GAAGATGCAC GTTACCTAGG TCTATGTACG TCTCGCTTTA TGCTACGTAC GCCTTACTCA GTAGAAGATA ACCCAATTAA GGCGTTTGAC TACGATGAGC AAGTAACAGA TGGCCACGAT AACTACCTAT GGGGCAACTC TGCGTACGCA ATGGCTTCTA AGATCAGTGA GTCATTTGCT AAGTACCGTT GGTGTCCAAA CATCATTGGT CCTCAAAGTG GTGGTGCAGT TCAAGACCTG CCGGTTTATA ACTTTGAAGC AATGGGTCAA ATTGAAACTA AGATCCCAAC TGAGATCCTT GTTTCTGACC GTCGTGAGTA CGAACTAGCA GAAGAGGGCT TTATTGCTCT AACCATGCGT AAAGGTTCTG ACAACGCGGC ATTCTTCTCT GCTAACTCTG TTCAAAAACC AAAAGTGTTT GCGAACACGC CAGAAGGCAA ACAAGCAGAG ATGAACTACA AGCTAGGTAC TCAGCTTCCT TACATGTTCA TCATCAACCG TCTGGCACAC TACATCAAAG TGCTACAGCG TGAGCAAATC GGTTCTTGGA AAGAGCGTTC AGACCTAGAA ATCGAACTGA ACAAGTGGAT CCGTCAATAC GTTTCTGACC AGGAAAACCC GCCAGCGGAA GTTCGTGGTC GTCGTCCACT GCGTGCTGCT AAGGTTGAGG TATCAGACGT AGAAGGCGAT CCAGGCTGGT ACAAAGTATC AATGTCTGTC CGTCCTCACT TCAAGTACAT GGGCGCAAGC TTCGACTTGT CTCTAGTGGG TAAACTAGAC CAGTAA
|
Protein sequence | MSAEAQAPEQ EAALVESGSL LDSILNETRL KPSDEGFDVA KRGVEAFISE LLSSSNTEKV DQSLVDLMIS EIDQKLSKQV DAILHSEEVQ AIESTWLGLK YLVEHTDFRE NIQIELISAK KDEVLDDFED APEVVKSGLY KQIYTREYGQ FGGKPVGAVI CDFAMSASSP DIKLMEYMAN VGAMSHAPFI TSASAKFFGL DSYEELPNLK DLKSVFEGPQ YAKWRGLREH EDARYLGLCT SRFMLRTPYS VEDNPIKAFD YDEQVTDGHD NYLWGNSAYA MASKISESFA KYRWCPNIIG PQSGGAVQDL PVYNFEAMGQ IETKIPTEIL VSDRREYELA EEGFIALTMR KGSDNAAFFS ANSVQKPKVF ANTPEGKQAE MNYKLGTQLP YMFIINRLAH YIKVLQREQI GSWKERSDLE IELNKWIRQY VSDQENPPAE VRGRRPLRAA KVEVSDVEGD PGWYKVSMSV RPHFKYMGAS FDLSLVGKLD Q
|
| |