Gene VIBHAR_05859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05859 
Symbol 
ID5557609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1046346 
End bp1047344 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content46% 
IMG OID640910333 
Producthypothetical protein 
Protein accessionYP_001447980 
Protein GI156977074 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAA CACTTACTGA TAAGTCGTAT GAGTTCAGCT TCTATCAAGC GGTATTGTTG 
CTTGAGAAGC ACTACCAGCT AGAGCCAAAT TCTAACTTTG TCGCGGTTGG TGAGAACAAG
TACTTCCACC AAGAGCGCAT AGAGTTTAGT GTCTCGCCGA GTATGGCTTT TCCAAAGAGT
GATATGGAAT TTATCACTCA CATGGAAAGA AATGGGCAAC AGTATTCGCG CGTCGAGACG
AACTTTTTAG GTTTACATGG GTCAAGTTCG CCATTGCCAG CGTCGTATAC CGAAAAGCTT
GCTGGTCGTG ACCCAGATGA TAACCCGGTA AAAGACTTCT TTGATTTCTT CCACAATCGT
TACACTAGCT TACTGTACCG TGTCTGGAAG AAATACCGTT ATCACGTACA GTACCAAAGC
GGTGCAAGTG ACGCGTTCTC AGGGCGGATC CTGCATTTGG CCGGCCTGTC TGATGTCATG
CAAGATTGCG ATGTCGCGGA GTTAGATCGA GCAAAGATCC TCTCTTATGT TAACCAGCTG
TCTACCCGCA CACGATCTCC TAAGCTGATT TCCGGTATTG TTTCCCATTA CTTCTCGCTA
CCGAGTGTAC GAATCGAAGA GTGGGTGTAT CGACGAGTAG ACATTGCAGA AAGTCAACGC
AACAAGCTTA ACCGTGCCAA CTGTGTATTA GGGCAGACCT TACATTTGGG GCAAAGTATT
GCGGATTTGA ACGGCAAATT TAACTTGTGC ATCGACAACA TTGATTTTGA GACGTTTAGG
CAATTTTCCT ACGATGGCGA GCTGCACAAG ACGCTGGTGG GATTGATGCG TTTTATTCTA
CGTGACCCGA TGTCTTGGGA CCTTAAGCTA ACTGTGAATC TCGATTCTAT CCCAGAGAAT
CAGCTGGGTA ATGGGGAAGG GAATCAGTTG GGTCAAACCT TTTGGCTTGG TAACCCAGGT
GAGAAAGATG CCAAGATACG TTTGATTGGT AGCATATAG
 
Protein sequence
MITTLTDKSY EFSFYQAVLL LEKHYQLEPN SNFVAVGENK YFHQERIEFS VSPSMAFPKS 
DMEFITHMER NGQQYSRVET NFLGLHGSSS PLPASYTEKL AGRDPDDNPV KDFFDFFHNR
YTSLLYRVWK KYRYHVQYQS GASDAFSGRI LHLAGLSDVM QDCDVAELDR AKILSYVNQL
STRTRSPKLI SGIVSHYFSL PSVRIEEWVY RRVDIAESQR NKLNRANCVL GQTLHLGQSI
ADLNGKFNLC IDNIDFETFR QFSYDGELHK TLVGLMRFIL RDPMSWDLKL TVNLDSIPEN
QLGNGEGNQL GQTFWLGNPG EKDAKIRLIG SI