Gene VIBHAR_05851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05851 
Symbol 
ID5557217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1035676 
End bp1036467 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID640910325 
Producthypothetical protein 
Protein accessionYP_001447972 
Protein GI156977066 
COG category[S] Function unknown 
COG ID[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATG CAGAAACCGA CGTCACCGTA GTCTTATTCC AACCAGAGCC TGGCAAACCG 
ATGGAGGTGA TGCCAGCGCC TGACTTATCT CGTAACATCG CGGTACAAGA CTTAAACATT
GAAAACATGG GCATCAACCC TTTGGTCGAT CAGTTCTCTT GGTTGATCGC CAGTTTGTCT
TGTATGTCCT CAATTCCTTG GCTTGATGAC CCAATGCCGT TTCGTGAACA AGTGGCTCGC
GAGATAAGAA AAGGCGAACG TAAGCTCAAT GAAATGGAAT TGGATCGCGC ATCCATTTTG
GTCATCCGAT ACTGTTTGTG TGCTGCGATT GATGAATCGG TTTGCCGACA AGAGTGGGGC
GCTAACAGCC ATTGGAGCCA GAACAGTTTG TTGTCCGAGT TCCACAATGA AACATCTGGC
GGCGATAAGT TTTTCGTTAT TCTCGAGCGT TTAAAAGCAG ACCCGCGCAA ATACCGTCAC
GTCATCGAGT TTCTCTATTT GCTGCTTCAA CTTGGCTTTC AAGGCAAATA CGGCCGTGAA
GAGCGTGGTA ACGAAAAGCT CGCAGAAATC GGCAATACCA TTTATCGCCT AGTGCGTGAC
GAACGTTTGG CGGAGCAAGA GAAAGTCTCT CTGGTTAACC TTAAGGCCAA ATACCTCAAG
AAACCGTTAA AAAGGGTGAT TTCACCCAAA CTGATTTTAG GCGTCAGTGC GATCACCTTC
GCAATCATGT ATGCCGCGAC TTACATCGTT ATAGATTTAA AGTTTCAGCA ATTGCTTGAA
GTGTATCGAT AA
 
Protein sequence
MSYAETDVTV VLFQPEPGKP MEVMPAPDLS RNIAVQDLNI ENMGINPLVD QFSWLIASLS 
CMSSIPWLDD PMPFREQVAR EIRKGERKLN EMELDRASIL VIRYCLCAAI DESVCRQEWG
ANSHWSQNSL LSEFHNETSG GDKFFVILER LKADPRKYRH VIEFLYLLLQ LGFQGKYGRE
ERGNEKLAEI GNTIYRLVRD ERLAEQEKVS LVNLKAKYLK KPLKRVISPK LILGVSAITF
AIMYAATYIV IDLKFQQLLE VYR