Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05815 |
Symbol | |
ID | 5557126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1001438 |
End bp | 1002235 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640910289 |
Product | peptidase |
Protein accession | YP_001447936 |
Protein GI | 156977030 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCCTA TTATGAGAAC ATGGATCAAA GCCTCAGTGC TTTTGACAAT AGCTGGCTTA ACGGCATGCG GTTCCTCACC GACTGGTCGA AATCAAATTC TTATGTTTTC CGATCAAGAG ATGTCTTCGC TCGGTGCTAA ATCGTTTGAT CAGATGAAGC AAGAAATTCC GATAAGCAAA GATAAAAAGG TCAACGCATA TGTTCAATGT GTTGCCAAGC AGATTACCGA TACGATCCCG CCTCAAGCAG GGTTTAAAAA TTGGGAGGTT GTGGTGTTTG ATAGTGACCA AGTCAACGCA TTTGCCCTAC CCGGCGGTAA AATCGGCGTT TACACTGGAT TGCTGAAAGT AGCGAAAAAC CAAGACCAAC TTGCGACGGT TATTGGCCAC GAAGTAGCAC ACGTTTTAGC AGACCACAGC AATGAGCGTT TGTCTCAAAG CCAACTAGCA AACGCGGGAT TGTCGCTAGC TAACGTGGCG ATTGGTGCCT CTGAATATAA AGAGTATCAA CAGATGACCA TGGCAGCACT TGGTGTCGGT GTTCAGTACG GTGTGATACT TCCTTATGGC CGCACTCAAG AATCAGAAGC TGATATTGTG GGTTTAGGCT ACATGGCGAA AGCGGGCTTC GATCCAAATG AAAGCGTTGA TCTTTGGAAA AACATGGCTG CTACGGGTGG TGGACAACCG CCGGAGTTCT TCTCTACTCA CCCATCACAC AGCACTCGCA TCAAAGACTT ACAGGCAACC ATAGAAACGT TACCTGCGTC GAATGCGAAA GCGCCAAGAT GTGGTTAG
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Protein sequence | MDPIMRTWIK ASVLLTIAGL TACGSSPTGR NQILMFSDQE MSSLGAKSFD QMKQEIPISK DKKVNAYVQC VAKQITDTIP PQAGFKNWEV VVFDSDQVNA FALPGGKIGV YTGLLKVAKN QDQLATVIGH EVAHVLADHS NERLSQSQLA NAGLSLANVA IGASEYKEYQ QMTMAALGVG VQYGVILPYG RTQESEADIV GLGYMAKAGF DPNESVDLWK NMAATGGGQP PEFFSTHPSH STRIKDLQAT IETLPASNAK APRCG
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