Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05681 |
Symbol | |
ID | 5557967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 889540 |
End bp | 890355 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640910156 |
Product | hypothetical protein |
Protein accession | YP_001447806 |
Protein GI | 156976900 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3675] Predicted lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACTA AAAAACAGAA CGACAACGTG AAGCCTCTAA AACGATACCA ATACGAACGC TACGCCGTAC TCTGCAACCT CGCCTACCCC AGAGTCTTTA AACAGACCCG CTATGGATTC GATCCTAATG GACAGCGGAT CATTAAAAAC GAGTTTGGCA AAACCATGAT CCGTGTTCTG TGGAGTAAAA AGCGCACAGA AGTCGTTGTT GTGATTAAGG GGTCGCACAG CATTAGCGAT TGGCTTTTGA ACTTTGCCAT GTGGACTCGC AGTTGTAAGC GCTTAGGGCT CAACTATCGC ATCCATGCCG GTTTCTACCA TTTGTTATTT CAAGAAAGCC AACCTTCTCG AAATGAAGAT CGTCTTGGTT TGAGCGTGAT TGAAAGATTA GAGGCCACCG TCGTACCGCT GATTTTACAA GGCAAACGAA TCACAATTAC TGGGCATTCA TCGGGCGGCG CAATTGGCAG CGTGTTTGCC GACTATATCG AACGCAAGTA CCCGAAAAGC ATTAAACGAG TAGTCACATT TGGGCAGCCA GCAATTGGCG ATTGGACATT TAGAAAACGG TATGGGTTAG GCCATAAAAC CTATCGTATT TGTTGTGATA TCGACATTGT GACCTTTATG CCTCCGGTAC CTTTTCTCTA CTGGCATGTG GGTAAAATGC TTTGGCTTTA TAACGGAAGA ATTTATGAGA ATACGCCAAC ATTAATGCGG CTTGGACGTT CTTTGGTGAG TTGGATGATC CGCCCTTTTT CTTATCACTT GATGAGTAAG TACATTCGAA ACAAAGACTT CTTTGACGAG CGGTAG
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Protein sequence | MLTKKQNDNV KPLKRYQYER YAVLCNLAYP RVFKQTRYGF DPNGQRIIKN EFGKTMIRVL WSKKRTEVVV VIKGSHSISD WLLNFAMWTR SCKRLGLNYR IHAGFYHLLF QESQPSRNED RLGLSVIERL EATVVPLILQ GKRITITGHS SGGAIGSVFA DYIERKYPKS IKRVVTFGQP AIGDWTFRKR YGLGHKTYRI CCDIDIVTFM PPVPFLYWHV GKMLWLYNGR IYENTPTLMR LGRSLVSWMI RPFSYHLMSK YIRNKDFFDE R
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