Gene VIBHAR_05656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05656 
Symbol 
ID5557960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp865704 
End bp867401 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content46% 
IMG OID640910132 
Productchitinase 
Protein accessionYP_001447786 
Protein GI156976880 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3469] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGTA ACACGATGAA GCAAAAAGCG CTATATCGAG CAGTAGCAAT GGGTTTGAGT 
GGTCTTGCGA ACGTCGCATC CGCTAATGAG ATGGTAAATC CTGATGGTGG TGTCGTAGTG
GGTTACTGGC ATAACTGGTG CGATGGCGCT GGTTACAAGG GAGGTAATGC ACCGTGTGTA
ACATTGGATG AAGTTGATCC TATGTACAAT GTGGTTAACG TCTCCTTTAT GAAGGTATTC
AATACCAGTG AAGGTCGTAT TCCAACCTTT AAGCTCGATC CAAATATCGG CCTTTCAGAA
CAACAATTTA TTGACCAAAT TGAAGCTCTA AACCAACAAG GACGTGCCGT TCTCATCGCT
CTTGGTGGCG CAGATGCTCA CGTTGAACTT AGAACTGGTG ACGAACAAGC GTTCGCACAA
GAGATTATTC GTTTAACGGA TAAGTTCGGT TTTGATGGTC TAGATATCGA TTTAGAGCAG
TCAGCAGTAA CGGCAGAGAA CAACCAAACC GTAATTCCAG CTGCACTTCG CCTTGTAAAA
GAGCATTATC AACAACAAGG TAAGAACTTC CTAATTACGA TGGCGCCTGA ATTCCCTTAT
CTAACAGAAG GTGGCAAGTA TGTTCCTTAC ATTACTGGTT TAGAAGGGTA CTACGATTGG
ATCAACCCTC AGTTTTACAA TCAAGGTGGT GACGGTATTT GGGTTGATGG CGTGGGTTGG
ATAGCGCAAA ACAATGATGA GTTAAAACAA GAGTTTATTT ACTACATTTC GGACGCTCTA
TCGAACGGTA CACGCGGTTT CCACAAAATC CCGCATGACA AACTGGTGTT TGGTATCCCA
TCTAACATTG ATGCTGCTGC AACGGGCTTT GTTCAAAACC CTCAAGACCT TTACGACGCG
TTTGATCAAC TTAAAGCGCA AGGGCAGGCA CTTCGTGGCG TAATGACATG GTCGGTGAAC
TGGGATATGG GCACCGATAA AAATGGCCAA GCGTACGGTG AAAAATTCGT GAAGGATTAC
GGTCCGTTTA TCCACGGGCA GACTCCACCA CCAAGTGAAG GTGAACCAGT TTTTAGTGGC
CTCAACGATG TTCGTGTGCA TCACGGTAGT TCATTTGACC CGTATGCAGG TGTTACTGCG
TCTGATAAAG AAGATGGAGA CCTAACCAAC AGCATCACTG TCGAAGGTTC AGTTGATGTG
AACACGGTAG GCACATATGT TTTGGTTTAC AGTGTAAAAG ACAGCGACAA CAATGAAACC
AAGCAAAGTA GAACGGTTGT TGTTTACAGC CTAGTGCCTG AGTTTGAAGG TGTCGCAGAT
ACGACCATCC AGCTTGGTGA CGCTTTTGAC CCAATGGCAG GCGTAAAAGC GACGGATGCA
GAAGACGGTG ATTTGACTGA TCAAGTGCGT GTAGAAGGCA GCGTAGATGT GAACGTACTA
GGTGTCTACG ACTTGGTTTA CCGCGTAACG GACAGTGCTA ATCAAACTAC GACTGCACAA
CGCTCTGTGA TTGTTTCTGA TGGCAGCAGT TACCCTCCGT ATGAATCTGG AAAAACGTAT
GAAGCAGGTG ACATTGTCAC AGGTTCAGAT GGCAACTTGT ATCAATGTAA ACCATGGCCA
TACACGGGCT GGTGTTCAAA CCCTTCTTAT GCGCCAGGTG AAACCGTTTA CTGGTCAGAC
GCTTGGGATA AGTTGTAA
 
Protein sequence
MRGNTMKQKA LYRAVAMGLS GLANVASANE MVNPDGGVVV GYWHNWCDGA GYKGGNAPCV 
TLDEVDPMYN VVNVSFMKVF NTSEGRIPTF KLDPNIGLSE QQFIDQIEAL NQQGRAVLIA
LGGADAHVEL RTGDEQAFAQ EIIRLTDKFG FDGLDIDLEQ SAVTAENNQT VIPAALRLVK
EHYQQQGKNF LITMAPEFPY LTEGGKYVPY ITGLEGYYDW INPQFYNQGG DGIWVDGVGW
IAQNNDELKQ EFIYYISDAL SNGTRGFHKI PHDKLVFGIP SNIDAAATGF VQNPQDLYDA
FDQLKAQGQA LRGVMTWSVN WDMGTDKNGQ AYGEKFVKDY GPFIHGQTPP PSEGEPVFSG
LNDVRVHHGS SFDPYAGVTA SDKEDGDLTN SITVEGSVDV NTVGTYVLVY SVKDSDNNET
KQSRTVVVYS LVPEFEGVAD TTIQLGDAFD PMAGVKATDA EDGDLTDQVR VEGSVDVNVL
GVYDLVYRVT DSANQTTTAQ RSVIVSDGSS YPPYESGKTY EAGDIVTGSD GNLYQCKPWP
YTGWCSNPSY APGETVYWSD AWDKL