Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05656 |
Symbol | |
ID | 5557960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 865704 |
End bp | 867401 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910132 |
Product | chitinase |
Protein accession | YP_001447786 |
Protein GI | 156976880 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3469] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGTA ACACGATGAA GCAAAAAGCG CTATATCGAG CAGTAGCAAT GGGTTTGAGT GGTCTTGCGA ACGTCGCATC CGCTAATGAG ATGGTAAATC CTGATGGTGG TGTCGTAGTG GGTTACTGGC ATAACTGGTG CGATGGCGCT GGTTACAAGG GAGGTAATGC ACCGTGTGTA ACATTGGATG AAGTTGATCC TATGTACAAT GTGGTTAACG TCTCCTTTAT GAAGGTATTC AATACCAGTG AAGGTCGTAT TCCAACCTTT AAGCTCGATC CAAATATCGG CCTTTCAGAA CAACAATTTA TTGACCAAAT TGAAGCTCTA AACCAACAAG GACGTGCCGT TCTCATCGCT CTTGGTGGCG CAGATGCTCA CGTTGAACTT AGAACTGGTG ACGAACAAGC GTTCGCACAA GAGATTATTC GTTTAACGGA TAAGTTCGGT TTTGATGGTC TAGATATCGA TTTAGAGCAG TCAGCAGTAA CGGCAGAGAA CAACCAAACC GTAATTCCAG CTGCACTTCG CCTTGTAAAA GAGCATTATC AACAACAAGG TAAGAACTTC CTAATTACGA TGGCGCCTGA ATTCCCTTAT CTAACAGAAG GTGGCAAGTA TGTTCCTTAC ATTACTGGTT TAGAAGGGTA CTACGATTGG ATCAACCCTC AGTTTTACAA TCAAGGTGGT GACGGTATTT GGGTTGATGG CGTGGGTTGG ATAGCGCAAA ACAATGATGA GTTAAAACAA GAGTTTATTT ACTACATTTC GGACGCTCTA TCGAACGGTA CACGCGGTTT CCACAAAATC CCGCATGACA AACTGGTGTT TGGTATCCCA TCTAACATTG ATGCTGCTGC AACGGGCTTT GTTCAAAACC CTCAAGACCT TTACGACGCG TTTGATCAAC TTAAAGCGCA AGGGCAGGCA CTTCGTGGCG TAATGACATG GTCGGTGAAC TGGGATATGG GCACCGATAA AAATGGCCAA GCGTACGGTG AAAAATTCGT GAAGGATTAC GGTCCGTTTA TCCACGGGCA GACTCCACCA CCAAGTGAAG GTGAACCAGT TTTTAGTGGC CTCAACGATG TTCGTGTGCA TCACGGTAGT TCATTTGACC CGTATGCAGG TGTTACTGCG TCTGATAAAG AAGATGGAGA CCTAACCAAC AGCATCACTG TCGAAGGTTC AGTTGATGTG AACACGGTAG GCACATATGT TTTGGTTTAC AGTGTAAAAG ACAGCGACAA CAATGAAACC AAGCAAAGTA GAACGGTTGT TGTTTACAGC CTAGTGCCTG AGTTTGAAGG TGTCGCAGAT ACGACCATCC AGCTTGGTGA CGCTTTTGAC CCAATGGCAG GCGTAAAAGC GACGGATGCA GAAGACGGTG ATTTGACTGA TCAAGTGCGT GTAGAAGGCA GCGTAGATGT GAACGTACTA GGTGTCTACG ACTTGGTTTA CCGCGTAACG GACAGTGCTA ATCAAACTAC GACTGCACAA CGCTCTGTGA TTGTTTCTGA TGGCAGCAGT TACCCTCCGT ATGAATCTGG AAAAACGTAT GAAGCAGGTG ACATTGTCAC AGGTTCAGAT GGCAACTTGT ATCAATGTAA ACCATGGCCA TACACGGGCT GGTGTTCAAA CCCTTCTTAT GCGCCAGGTG AAACCGTTTA CTGGTCAGAC GCTTGGGATA AGTTGTAA
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Protein sequence | MRGNTMKQKA LYRAVAMGLS GLANVASANE MVNPDGGVVV GYWHNWCDGA GYKGGNAPCV TLDEVDPMYN VVNVSFMKVF NTSEGRIPTF KLDPNIGLSE QQFIDQIEAL NQQGRAVLIA LGGADAHVEL RTGDEQAFAQ EIIRLTDKFG FDGLDIDLEQ SAVTAENNQT VIPAALRLVK EHYQQQGKNF LITMAPEFPY LTEGGKYVPY ITGLEGYYDW INPQFYNQGG DGIWVDGVGW IAQNNDELKQ EFIYYISDAL SNGTRGFHKI PHDKLVFGIP SNIDAAATGF VQNPQDLYDA FDQLKAQGQA LRGVMTWSVN WDMGTDKNGQ AYGEKFVKDY GPFIHGQTPP PSEGEPVFSG LNDVRVHHGS SFDPYAGVTA SDKEDGDLTN SITVEGSVDV NTVGTYVLVY SVKDSDNNET KQSRTVVVYS LVPEFEGVAD TTIQLGDAFD PMAGVKATDA EDGDLTDQVR VEGSVDVNVL GVYDLVYRVT DSANQTTTAQ RSVIVSDGSS YPPYESGKTY EAGDIVTGSD GNLYQCKPWP YTGWCSNPSY APGETVYWSD AWDKL
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