| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05603 |
|---|
| Symbol | |
|---|
| ID | 5558754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 804014 |
|---|
| End bp | 805333 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640910079 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001447733 |
|---|
| Protein GI | 156976827 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTG TTCGTTATTC ACTCATTGCT GTCGCTGCTA CCGCATTCTC CCTCGCAGCT
TACCTCACCT ATCAAGCAGA AACGAAACCT GAAGAAATCA CCATTAAGGT GACGCCTTAT
TCTCAGTTAG AGCGCGCTCC AAAGTCTGGC GCTCAATCAA CGGAGGCGAC ACAAAAAAAT
GGCCGCTCCG CTGAAGGTCA TGACAACATT GCTCGTATTC ATTACTTCGT CAAAGTCGGC
GATACGCTTA GCACCATTTT TTCTTCATGG GGTGTGCCGT ACGAAACGAC GCAGAAGCTT
CTTGAAGCTG ACTTAATCTC ACTTAAGCTC GATACCATTA AACCAGGCGA CCACCTCGAG
TTTGTGGTGG ATAGAGACAC TAAAACCTTA CAGCAAGTGA TTTTCCATGA GAGTCTCGTT
GAACGCGCGA TCTACACGCA AAACAGCGAT GGTACTTTTG CGTATGACTT TGTGGAAGAG
CCGGGTGAGT GGCGTGAAGA AATGCACTCA GGGACGATCA ACGGTAGCTT CTCATCGTCT
GCTCATCGAC AAGGCTTAAC TACGACCCAG ATTGCCAACA TCACACGTGT ATTGCGCGAT
AAAGTGAATT TTGCTCGCGA ACTTCGTGCT GGTGATAGTT TTCATGTGTT GGTTCGTCGC
CAATATGTTG ATGATCATTT AACTGGCAAT ACAGAAGTAC AAGGCATTGC AATCAAGATG
CGCGGCAAAG ATGTGGAGGC GTTTTTGGCG GAAGATGGAC GTTTTTATGA CCGAGATGGA
AACAGCCTTG AGCAAGCATT CAATCGTTAC CCAGTCGACA AACAGTTCCG TCGTATTACC
TCACCTTTCA ACCCTTATCG GAAACACCCA GTGACAGGAC GTATCTCACC ACATAATGGC
ACGGATTTCG CGACGCCTGT TGGCTCTCCA GTCTACTCTA CTGGCGATGG TAAAGTGATT
GCGATTCGTA ACCATCCTTA TGCGGGGAAA TACTTGGTGA TAGAGCATAA CAGTGTCTAC
AAAACGCGTT ATCTGCATTT GAGCCGTTTC TTAGTTAAGA AAGGAGACCA TGTTAAGCGT
GGGCAGAAAA TTGCGCTTTC CGGAGCGACA GGCCGTCTAA CAGGCCCACA CCTGCACTTC
GAAGTACTGG TACGAAATCG CGCGGTCGAT TCAATGAAAG CAGACTTACC ACTGGCAAGC
TCGATCCCAA GTAAAGACAA GCCTGCATTC TTGGCAAGAA TTTCTCAGTT TGATGACATG
GTTGCCACAG AGCAAAACGC TAGCAATGTG GACGCGAAAG AGGAAAAACG AACTTCTTGA
|
|---|
| Protein sequence | MKFVRYSLIA VAATAFSLAA YLTYQAETKP EEITIKVTPY SQLERAPKSG AQSTEATQKN
GRSAEGHDNI ARIHYFVKVG DTLSTIFSSW GVPYETTQKL LEADLISLKL DTIKPGDHLE
FVVDRDTKTL QQVIFHESLV ERAIYTQNSD GTFAYDFVEE PGEWREEMHS GTINGSFSSS
AHRQGLTTTQ IANITRVLRD KVNFARELRA GDSFHVLVRR QYVDDHLTGN TEVQGIAIKM
RGKDVEAFLA EDGRFYDRDG NSLEQAFNRY PVDKQFRRIT SPFNPYRKHP VTGRISPHNG
TDFATPVGSP VYSTGDGKVI AIRNHPYAGK YLVIEHNSVY KTRYLHLSRF LVKKGDHVKR
GQKIALSGAT GRLTGPHLHF EVLVRNRAVD SMKADLPLAS SIPSKDKPAF LARISQFDDM
VATEQNASNV DAKEEKRTS
|
|---|
| |