Gene VIBHAR_05555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05555 
Symbol 
ID5558528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp759424 
End bp760518 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content50% 
IMG OID640910032 
Productpyruvate dehydrogenase E1 component, alpha subunit 
Protein accessionYP_001447686 
Protein GI156976780 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTC AGGCATTACC CATGCATCGG TTTATCGACC ATGATGGGAA CCTCGTCAGC 
CAACTACCCA ACTGGGCTGA CCTAGAAGTA CTGGTCGGTT TTTACCAAGA CATGGTATTA 
ACTCGCACCT ACGATAACAA AGCCGTTGCC CTGCAACGCA CCGGCAAATT AGGCACCTAC 
CCTTCACACC TTGGCTCGGA AGCCATTGGG ATAGCGGTTG GCAGAGCACT AAAAGCCAGT 
GATGTCTTTG TTCCTTACTA TCGCGACATG CCAGCGATGT GGTGTCGTGG TATTGGTATG 
GAAAAGAACC TGCAATACTG GGGAGGCGAT GAACGCGGTA GCGACTTCGC ACCAGAAGGC 
AGCCCATTCC CTAGCCGAGA TTTACCTTTC TGTGTTCCTA TCGCCACCCA ATGTACTCAT 
GCGGTGGGCG TTGCATCTGC ACTGAAGATT CAAGGTAATC ATGAGGCAGC TTTAGTGATG 
TGCGGTGACG GCGCGACATC TAAAGGTGAC TTCCTCGAAT CCGTCAACTG TGCGGGCGCT 
TGGAACATTC CATTAGTCTT TATAGTGAAC AACAACCAGT GGGCCATCTC CGTACCGCGC 
ACCTTACAAT GCGCCGCGGA GTTTTTATCA GAAAAAGCCA AAGGTGCAGG TATTCCTGGC 
ATTACTGTAG ATGGTAATGA CATCGTTGCG GTATTTGACG CAACAATGAC TGCCCTCGAC 
CGAGCCAGAA AAGGCAAAGG CGCGACGTTA ATAGAAGCCG TAAGTTACCG CTTGAGCGAT 
CACACCACTG CCGACGACGC AACCCGTTAT CGTAATGAGG ATGAAGTTCA AACGGCTTGG 
CAATATGAGC CCGTCCGTCG CCTTAAAGCC TTTCTCACCA ATCAAGGCGT TTGGAGTAAC 
GAGAAAGAGC AAGAGTGGCA AGCCCACTGC AAAGAACAAG TTGAACTCGC CGTTGAACGT 
TATCTCAATA TGCCGAATCA AGCGCCTGAA ACGGGCTTTG ACTTCCTTTA TGAATCCCTA 
CCCCAAGAGC TTCATGCACA AAGAGATGAA CTGATCAACA AAGCAATGCG AATGCAGGGA 
GGGAAACATG GCTGA
 
Protein sequence
MNVQALPMHR FIDHDGNLVS QLPNWADLEV LVGFYQDMVL TRTYDNKAVA LQRTGKLGTY 
PSHLGSEAIG IAVGRALKAS DVFVPYYRDM PAMWCRGIGM EKNLQYWGGD ERGSDFAPEG 
SPFPSRDLPF CVPIATQCTH AVGVASALKI QGNHEAALVM CGDGATSKGD FLESVNCAGA 
WNIPLVFIVN NNQWAISVPR TLQCAAEFLS EKAKGAGIPG ITVDGNDIVA VFDATMTALD 
RARKGKGATL IEAVSYRLSD HTTADDATRY RNEDEVQTAW QYEPVRRLKA FLTNQGVWSN 
EKEQEWQAHC KEQVELAVER YLNMPNQAPE TGFDFLYESL PQELHAQRDE LINKAMRMQG 
GKHG