| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05540 |
|---|
| Symbol | |
|---|
| ID | 5558544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 746819 |
|---|
| End bp | 747790 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640910017 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001447671 |
|---|
| Protein GI | 156976765 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA ATAAATACAG CGCCAGATTT CAGATGATGG GCACCTTTAT CGATGTGGTG
GTGTATCACT CGAAGGGTGA GCAACTTATA AGAGAAGCTT ACGCGCAACT CGCCGATTAC
GCAGAGCGAT TTACGGTCAA TCAACCCGAC TCTGAATTGA TGCGTGTCAA TCAAAATGCG
GGCATAGCAC CTTTGGTGGT AGCAAATGAC CTATTTAACC TGATTAAGCT TGCTAAACAG
CACAGCGAAG ACACAAGAAA TCCTTTTAAC GTTGCAGTTG GTCCGCTTGT AAAAGCTTGG
AGAATTGGTT TTAAGGATGC CAAAGTGCCG TCTCATGATG TGATTACCGA CAAGTTATCG
TTGGTCGATC CTACCAAGAT CATTCTGAGC GAAGATGACC ACTCGGTGTT CTTAAGTCAA
AAGGGGATGG AGATAGACTT GGGAGCGATA GCTAAAGGTT ACTTCGCTGA TCAGGTAAAG
AACAAACTGG TTGAGGCTGG CGTGCAAAGT GGTTTTATCA GTTTAGGTGG AAACGTACTG
ACCATCGGTC ATTCGCCAGA TAACAGCAAC AAAGCATGGA ATGTGGGCAT TCAGAACCCA
TTATCACAGC GCGGTGATGT CGTTCGCATC GTACCTTTAC AGGGCATGTC GATGGTGACA
TCGGGTATCA ATGAGCGATT TTTTGAATCA AATGGGCAGC GTTATCATCA CTTGTTGGAT
GCCAAAACGG GGATACCAAT TTCAACCGAT ATCGCTAGTT TGACGATTAT CTCTCGGCTG
TCTGTCGATG GTGAAATTTG GAGTACCGCA GGCTTTTTAC CAAGCGTAGA AGAAGCGATG
TCGTACCTAA ATCAGCAACA TTGCATCGAG GCTGTGGTTG TTTCAAAACA AGGAGAAGTG
CACGTCACAC GGGGGCTGAT GGATTATAAT GGCTGTATTT TATTGCGAGA AGAGCCTGCA
CTTACAGAGT AA
|
|---|
| Protein sequence | MSTNKYSARF QMMGTFIDVV VYHSKGEQLI REAYAQLADY AERFTVNQPD SELMRVNQNA
GIAPLVVAND LFNLIKLAKQ HSEDTRNPFN VAVGPLVKAW RIGFKDAKVP SHDVITDKLS
LVDPTKIILS EDDHSVFLSQ KGMEIDLGAI AKGYFADQVK NKLVEAGVQS GFISLGGNVL
TIGHSPDNSN KAWNVGIQNP LSQRGDVVRI VPLQGMSMVT SGINERFFES NGQRYHHLLD
AKTGIPISTD IASLTIISRL SVDGEIWSTA GFLPSVEEAM SYLNQQHCIE AVVVSKQGEV
HVTRGLMDYN GCILLREEPA LTE
|
|---|
| |