| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05539 |
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| Symbol | |
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| ID | 5558543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 743709 |
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| End bp | 746723 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640910016 |
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| Product | oxidoreductase |
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| Protein accession | YP_001447670 |
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| Protein GI | 156976764 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGT TAATCGATGA AATTGTATTT CAATCAGGGG TCAAACTGCA TAATCGTATC
GTGATGGCAC CGATGACGAT TCAGTCTGCA TTCTTTGATG GCGGCGTAAC GCAAGAGATG
ATCAACTACT ACGCGGCACG TTCTGGTGAT GCGGGGGCAA TCATTGTCGA GAGTGCGTTT
GTAGAAAATT ATGGTCGTGC TTTCCCGGGT GCTCTTGGTA TTGATACCGA CAGCAAAATC
GCAGGCTTAA CTAAGCTTGC CGATGCGATT AAAGCAAAAG GCTCTAAAGC CATTTTGCAG
ATCTACCATG CCGGTCGTAT GGCAAACCCT GAGTTCAATG GCGGACACCA ACCGATTTCT
GCAAGTCCTG TCGCTGCCCT ACGTGACAAC GCTGAAACAC CACTTGAGAT GACCAAAGAA
CAAATCGAAG AGATGATCGA GCGCTTTGGT GATGCAGTAA ACCGTGCAAT TCTTGCTGGC
TTCGATGGCG TTGAAATTCA CGGCGCAAAC ACATACCTAA TTCAGCAATT CTTCTCGCCA
CACTCAAACC GTCGTCACGA CAAATGGGGT GGTAACATTG AAAGGCGTAC CTCCTTCCCA
CTAGCTGTAC TTGCAAAAAC CAAGCAAGTA GCTGAGCAAC ATAACAAATC TGATTTCATC
ATCGGTTACC GTTTCTCCCC AGAGGAAATC GAACAGCCGG GCATCCGTTT TGATGACACC
ATGTTCCTAC TAGACAAGCT TGCAACTCAC GGTTTGGATT ACTTCCACTT CTCAATGGGT
AGCTGGTTAC GTAACTCAAT CGTTACGCCT GAGGATCAAG AGCCACTTAT CGACAAATAC
CGTAAACTTC AATCTGAAAG TGTCGCAAAA GTACCAGTGA TTGGTGTTGG TGGTATTGCT
CAGCGCAAAG ATGCAGAAAA TGCACTAGGG CAAGGTTACG ACATGGTCAG TGTCGGTAAA
GGTTATTTGG TTGAACCTAC TTGGGCAAAC AAAGCGCTTA ACGATGAGAC CTGTGCTGAG
TTCGCGGACA TCGCACAACA AGAAGCGCTG CAAATTCCAA CGCCCCTTTG GGAAATCATG
GACTACATGA TTGTGGACAG CGCAGCAGAG GCATTGAAGC ACCAACGCAT CAAAGAGCTG
CAGAATGTTC CAATCAAATT TAACTCAGGC GAGTACACGG CGTATGGTCG CGGTCACAAT
GGTGACTTGC CGGTTACCGT TACTTTCTCT GAAGATAAAA TCCTCGACAT TGTGGTGGAC
TCTTCTAAGG AATCAGACGG TATCGCAAAC CCAGCGTTTG AACGTATTCC TCAACAAATC
CTTGATGGTC AAACACTGAA CATCGACGTG ATATCCGGTG CGACAGTCAG CAGCCAAGCA
GTACTGGACG GGGTGTCGAA CGCCGTTGAT CTGGCGGGTG GTAACTCAGA AGCACTACGA
TTCAAAGCTA AAGAAGCCGT GTCATGGTCA TCGAAAACCA TCGAAGAAAC AGTGGATATC
GTGGTTGTTG GCGGCGGCGG TGCTGGCTTG AGTGCAACCT TAACAGCACT AGATAAAGGC
AAGTCGGTTA TTTTGCTTGA GAAGTTCCCT GCAATCGGTG GTAACACGGT GCGTACTGGC
GGTTGGGTGA ACGCGGCAGA ACCAAAATGG CAAGGTGATT TCCAAGCACT TCCTGGAGAA
AAAGAAACCT TGATGCAGCT AGCGAAAACG GAGGAATCCG AGTTTGCGGG TGAGTACCTT
GAAGACTTCA AAGTACTTAA AGCACAGCTA GACGGTTACT TTACAGATCT TGAGAACGGT
AAGCAGTACT TGTTCGATTC TGTCGAATTA CACCGCATTC AAACCTACCT TGGCGGTAAA
CGTACTGACC TGAATGGTGA ATCAATTTAT GGTCAATACG ATTTGGTTGA GACCCTAACA
TCTCGCTCTA TGGAATCTAT TGATTGGTTG AGTGAAAAGG GCATTGATTT TGACCGTAGC
GTTGTTGAGA TTCCAGTTGG TGCCTTGTGG CGTCGTGCAC ACAAACCTAA ACGTCAAAAA
GGCGTAGAGT TTGTCGACAA ACTATCAAAA CGCATCCAAG AGCAAAACGG TCGCATCATT
ACGGATACAC GTGCAACGGA TTTGATGCTT GATAACGGTA AAGTGGTGGG CATCAAAGCG
GTTCAAGCGG ACGGTACAGA GCTTATCCTC CACGTTAATT ATGGTGTGGT GTTGGCCTCT
GGTGGTTTCG GCGCAAACAC TCAGATGATT AAAAAGTACA ACACATACTG GAAAGAAATC
GCGGACGACA TCAAGACCAC AAACTCACCA GCACTGGTTG GTGACGGCAT TGAAATTGGT
GAGAAAGCGG GCGCAGAATT AGTTGGTATG GGCTTTGTGC AATTAATGCC TATTGGTGAC
CCTAAATCAG GTGCGCTGTT AACCGGCCTG ATTGTGCCAC CAGAGAACTT TGTGTTCGTG
AACAAGCAAG GTAATCGCTT CGTTGATGAG TGTGGTAGCC GTGATGTGCT TTCTGGTGCG
TTCTTCGATA ACGGTGGTCT GATTTACATG ATTGCGGACG AGAACATTCG TCAAACCGCA
GCGAATACGT CAGATGAAAC CATCGAGCGC GAAATCAAAG AAGGCATCAT TATTCAAGCT
GATACGTTAG AAGAGTTGGC TGAGAAGATT GGCGTTCCGA CGCAAGAGCT AACTAACACC
ATCGCACAAT ACAACGCTTG TGTGGATGCA GGACATGATC CTGAGTTCCA TAAGAGTGCG
TTCGGTTTGA AAGTGGAAAA AGCACCGTTT TACGCGACGC CACGTAAGCC TTCGGTTCAC
CACACAATGG GTGGCTTGAA GATTGATACT AAGGCGCGAG TGATTGGTAA AGACGGCGAA
GTTATTCAAG GTCTGTACGC AGCAGGCGAA GTGGTGGGTG GTATCCACGC GGGTAACCGT
CTTGGTGGTA ACGCGCTGAT CGATATCTTC ACTTATGGTC GTATCGCTGG TGAGAGTGCG
TCTGATCTTA TTTAG
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| Protein sequence | MAQLIDEIVF QSGVKLHNRI VMAPMTIQSA FFDGGVTQEM INYYAARSGD AGAIIVESAF
VENYGRAFPG ALGIDTDSKI AGLTKLADAI KAKGSKAILQ IYHAGRMANP EFNGGHQPIS
ASPVAALRDN AETPLEMTKE QIEEMIERFG DAVNRAILAG FDGVEIHGAN TYLIQQFFSP
HSNRRHDKWG GNIERRTSFP LAVLAKTKQV AEQHNKSDFI IGYRFSPEEI EQPGIRFDDT
MFLLDKLATH GLDYFHFSMG SWLRNSIVTP EDQEPLIDKY RKLQSESVAK VPVIGVGGIA
QRKDAENALG QGYDMVSVGK GYLVEPTWAN KALNDETCAE FADIAQQEAL QIPTPLWEIM
DYMIVDSAAE ALKHQRIKEL QNVPIKFNSG EYTAYGRGHN GDLPVTVTFS EDKILDIVVD
SSKESDGIAN PAFERIPQQI LDGQTLNIDV ISGATVSSQA VLDGVSNAVD LAGGNSEALR
FKAKEAVSWS SKTIEETVDI VVVGGGGAGL SATLTALDKG KSVILLEKFP AIGGNTVRTG
GWVNAAEPKW QGDFQALPGE KETLMQLAKT EESEFAGEYL EDFKVLKAQL DGYFTDLENG
KQYLFDSVEL HRIQTYLGGK RTDLNGESIY GQYDLVETLT SRSMESIDWL SEKGIDFDRS
VVEIPVGALW RRAHKPKRQK GVEFVDKLSK RIQEQNGRII TDTRATDLML DNGKVVGIKA
VQADGTELIL HVNYGVVLAS GGFGANTQMI KKYNTYWKEI ADDIKTTNSP ALVGDGIEIG
EKAGAELVGM GFVQLMPIGD PKSGALLTGL IVPPENFVFV NKQGNRFVDE CGSRDVLSGA
FFDNGGLIYM IADENIRQTA ANTSDETIER EIKEGIIIQA DTLEELAEKI GVPTQELTNT
IAQYNACVDA GHDPEFHKSA FGLKVEKAPF YATPRKPSVH HTMGGLKIDT KARVIGKDGE
VIQGLYAAGE VVGGIHAGNR LGGNALIDIF TYGRIAGESA SDLI
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