Gene VIBHAR_05526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05526 
Symbol 
ID5558556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp734490 
End bp735458 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content42% 
IMG OID640910003 
Producthypothetical protein 
Protein accessionYP_001447657 
Protein GI156976751 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA AAATTGCAGC AGTTACGATG TTTGCTGCTC TTGTCAGTGG CTGTGCTACT 
CAGAGCCCTC AGATTAAGTC TACAGAAAGT AGCCATTCAC AAGCTGAGCA ACTTCAGGCT 
CAAAAACAGG CCCTTGAAAA CTCATCTCAG TCACCAACCT TGAAACGCAA AGTCGCATTA 
GGTCGAATTT CTAATGAGAC CATTTATGGT AAAAGTTTAC TGCGAGATGA AAAAGGAGAT 
GTCCTCGGTA AACAAGTTAC GGACATGTTA TCCAAAGCTC TGACTGAGTC AGGCCAATAT 
ATGGTTTTTG AAAGACCGGA CATTGAGCGA TTGAAAGATG AAGCAAAGCT TACCGGTGAA 
GAGTTAAACA TAGTCGGTGT AGACACTTTA ATCATTGGTT CATTAACGGA GTTTGGCCGC 
AAAACTGAAG GTGAAAGTGG CTTCCTATCA TCGACCAAAA AACAAGTAGC TTATGCAAAA 
GTCGACCTAC GACTAGTAGA TAGCAAAACA GGACTCGTAT ACCACTCACT TTCAGGTGCT 
GGCGAATCGA GTTCAGAGTC CGCTTCTGTG GCAGGGTTTG GCTCTAAGTC TTCTTATGAT 
GGCACGTTGA ACGATTCTGC AATCGCAAAC GCAATTTCTG ACGCTATTAG TAAGCTAACG 
GCAGAAATCC AAACAAGACC ATGGACAACT GACATCCTTG CAGTCGAAGA CGGCATGATT 
TACATCAGTG GTGGCGAATC TCAAGGCATC AAGTCAGGTA TGACTTTCAA TGTTGAAACT 
CAAGGCAAAC AAGTGAAATC AAAACAAACT GGTTTTGATA TCACCCTTCC AGGGAAAAAA 
GTCGCTGAGA TCGAAATTGT TCAAACTTTT GGTGATACAG AGACAAACGA AGGTGCCATC 
GCTGTCGTAA ACTCTGGTTC AATTGCAAAC TTTGATATCA ACAGCTTAAA TGTTGTGGAG 
CAAAAATAA
 
Protein sequence
MKSKIAAVTM FAALVSGCAT QSPQIKSTES SHSQAEQLQA QKQALENSSQ SPTLKRKVAL 
GRISNETIYG KSLLRDEKGD VLGKQVTDML SKALTESGQY MVFERPDIER LKDEAKLTGE 
ELNIVGVDTL IIGSLTEFGR KTEGESGFLS STKKQVAYAK VDLRLVDSKT GLVYHSLSGA 
GESSSESASV AGFGSKSSYD GTLNDSAIAN AISDAISKLT AEIQTRPWTT DILAVEDGMI 
YISGGESQGI KSGMTFNVET QGKQVKSKQT GFDITLPGKK VAEIEIVQTF GDTETNEGAI 
AVVNSGSIAN FDINSLNVVE QK