Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05338 |
Symbol | |
ID | 5556777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 570193 |
End bp | 571107 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909815 |
Product | transcriptional regulator |
Protein accession | YP_001447470 |
Protein GI | 156976564 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGAATA ACATCAACTT GAATCTGCTG CGCTCTTTGC ATGTATTGCT TGAAGAGTGC CATGTGAGCA GAACCGCGGA GCGTTTGCAC ATCACTCAAT CCGCGGTCAG TCGTCAACTA GCGCAGTTAC GCGAATTATG CGGCGACCCT TTATTGGTTC GGCAGGGTAA CCAATTGATT CCCACGCCAA GAGCGCTACT TCTAAAAGAG AAGTTGGACG ACTTATTGGC GGAATTCGAT CACCTTCTCG ATGACAAGCC TTTTGAACCC GGGGATTGGA AAGGAGAGTT AGTATTAGCA TCGAGTGACT ATGTCGCGCA ATATGTACTC CCTGACATTG CTTCGCACTT TAGTAGTTTT GCTCCTCAGT TGGATATGGC GTATCGACTT TGGCAACCGG ACTTTCTTGA TAAACTTCAT GAGACAGGTA TTCATATTGC GTCTTCAATT TATCCAGAAC AGCCTAAAGG TGTATCCAGT GTGAAGATTG GTGAGGACTC GTCCGTGTGT TTGATGAAGG CCTCCCACCC GTTAGCAAAG CAAGACCATA TTAGTGTCGA AGATCTAATT TCGTATTCTC ACATCAAAGT GAACGGTGGA GGGGATAAAG ATTCCTATAC TGACTTGGCA TTGAGAGAGC TGGGTTATAC ACGCCACGTT ACCTTCAAGG TGCCTTTCTT TTCTGCTGCT ATCAATCGCT TAGTCTCAAG TGAGCATCTG ATGGTGGTAC CCGAGCATAT TGCCGTGAAT CTCGCGAAGC ATTGGGATTT AGCCCACAAA GCGTTGCCAC TCGAAACCCC TACTCATAAG TATTGGTTAA TGTGGCATCC AAAGTACGAT ACGGATCCGG CGCATAAATG GGCGCGAGAG GAGATTCTCT CGGTTATGCA AACCTCAGAG TATTCCATTC GTTAA
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Protein sequence | MLNNINLNLL RSLHVLLEEC HVSRTAERLH ITQSAVSRQL AQLRELCGDP LLVRQGNQLI PTPRALLLKE KLDDLLAEFD HLLDDKPFEP GDWKGELVLA SSDYVAQYVL PDIASHFSSF APQLDMAYRL WQPDFLDKLH ETGIHIASSI YPEQPKGVSS VKIGEDSSVC LMKASHPLAK QDHISVEDLI SYSHIKVNGG GDKDSYTDLA LRELGYTRHV TFKVPFFSAA INRLVSSEHL MVVPEHIAVN LAKHWDLAHK ALPLETPTHK YWLMWHPKYD TDPAHKWARE EILSVMQTSE YSIR
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