Gene VIBHAR_05338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05338 
Symbol 
ID5556777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp570193 
End bp571107 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content47% 
IMG OID640909815 
Producttranscriptional regulator 
Protein accessionYP_001447470 
Protein GI156976564 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAATA ACATCAACTT GAATCTGCTG CGCTCTTTGC ATGTATTGCT TGAAGAGTGC 
CATGTGAGCA GAACCGCGGA GCGTTTGCAC ATCACTCAAT CCGCGGTCAG TCGTCAACTA
GCGCAGTTAC GCGAATTATG CGGCGACCCT TTATTGGTTC GGCAGGGTAA CCAATTGATT
CCCACGCCAA GAGCGCTACT TCTAAAAGAG AAGTTGGACG ACTTATTGGC GGAATTCGAT
CACCTTCTCG ATGACAAGCC TTTTGAACCC GGGGATTGGA AAGGAGAGTT AGTATTAGCA
TCGAGTGACT ATGTCGCGCA ATATGTACTC CCTGACATTG CTTCGCACTT TAGTAGTTTT
GCTCCTCAGT TGGATATGGC GTATCGACTT TGGCAACCGG ACTTTCTTGA TAAACTTCAT
GAGACAGGTA TTCATATTGC GTCTTCAATT TATCCAGAAC AGCCTAAAGG TGTATCCAGT
GTGAAGATTG GTGAGGACTC GTCCGTGTGT TTGATGAAGG CCTCCCACCC GTTAGCAAAG
CAAGACCATA TTAGTGTCGA AGATCTAATT TCGTATTCTC ACATCAAAGT GAACGGTGGA
GGGGATAAAG ATTCCTATAC TGACTTGGCA TTGAGAGAGC TGGGTTATAC ACGCCACGTT
ACCTTCAAGG TGCCTTTCTT TTCTGCTGCT ATCAATCGCT TAGTCTCAAG TGAGCATCTG
ATGGTGGTAC CCGAGCATAT TGCCGTGAAT CTCGCGAAGC ATTGGGATTT AGCCCACAAA
GCGTTGCCAC TCGAAACCCC TACTCATAAG TATTGGTTAA TGTGGCATCC AAAGTACGAT
ACGGATCCGG CGCATAAATG GGCGCGAGAG GAGATTCTCT CGGTTATGCA AACCTCAGAG
TATTCCATTC GTTAA
 
Protein sequence
MLNNINLNLL RSLHVLLEEC HVSRTAERLH ITQSAVSRQL AQLRELCGDP LLVRQGNQLI 
PTPRALLLKE KLDDLLAEFD HLLDDKPFEP GDWKGELVLA SSDYVAQYVL PDIASHFSSF
APQLDMAYRL WQPDFLDKLH ETGIHIASSI YPEQPKGVSS VKIGEDSSVC LMKASHPLAK
QDHISVEDLI SYSHIKVNGG GDKDSYTDLA LRELGYTRHV TFKVPFFSAA INRLVSSEHL
MVVPEHIAVN LAKHWDLAHK ALPLETPTHK YWLMWHPKYD TDPAHKWARE EILSVMQTSE
YSIR