Gene VIBHAR_05303 details

Gene Information

• Locus tag: VIBHAR_05303
• ID: 5557037
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: -
• Start bp: 539460
• End bp: 540179
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640909780
• Product: oxidoreductase
• Protein accession: YP_001447436
• Protein GI: 156976530
• COG category: [R] General function prediction only
• COG ID: [COG4221] Short-chain alcohol dehydrogenase of unknown specificity

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC TGATTGTAAT CACAGGTGCA AGTTCTGGTA TTGGTGAAGC TATCGCACGC 
CGTCTAAGCG ACGAAGGTCA CCCACTTCTT CTTCTTGCTC GTCGTGTAGA GCGCTTAGAA 
GCACTAAACC TGCCAAACAC GCTATGTGAA AAAGTAGACG TTACTGAAAA AGCTTCATTT 
GAAGCGGCAA TTGCTAAAGC AGAAGAGAAA TTTGGCCCTG CTGACGCACT AGTAAACAAC 
GCAGGCGTGA TGCTACTTGG TCAAATTGAC ACACAAGATG CATCAGAGTG GAAACGTATG 
TTCGACGTGA ACGTACTTGG TTTGCTAAAC GGCATGCAGT CTGTGCTAGC ACCAATGAAA 
GCGCGTAACA GCGGTACTAT CATCAACATC AGCTCAATCG CAGGTAAAAA GACGTTCCCA 
GATCACGCAG CTTACTGTGG TACTAAATTC GCAGTTCACG CAATTTCTGA AAACGTTCGT 
GAAGAAGTGG CTGCATCAAA CGTTCGCGTA ACAACAATCG CACCAGGCGC TGTAGAAACT 
GAACTGCTTT CTCACACAAC ATCACAAGAA ATCAAAGATG GTTACGGTGC GTGGAAAGAA 
GATATGGGCG GCGTGCTAGC TGCTGATGAC ATCGCACGTG CAGTTGTATT TGCTTACCAA 
CAACCACAAA ACGTTTGTAT CCGTGAAATC GCTCTAGCAC CAACTAAGCA ACAGCCTTAA 

 

Protein sequence

MKKLIVITGA SSGIGEAIAR RLSDEGHPLL LLARRVERLE ALNLPNTLCE KVDVTEKASF 
EAAIAKAEEK FGPADALVNN AGVMLLGQID TQDASEWKRM FDVNVLGLLN GMQSVLAPMK 
ARNSGTIINI SSIAGKKTFP DHAAYCGTKF AVHAISENVR EEVAASNVRV TTIAPGAVET 
ELLSHTTSQE IKDGYGAWKE DMGGVLAADD IARAVVFAYQ QPQNVCIREI ALAPTKQQP