Gene VIBHAR_05293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05293 
Symbol 
ID5556877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp531918 
End bp532631 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID640909770 
Producthypothetical protein 
Protein accessionYP_001447426 
Protein GI156976520 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAC AAGACATTAA GCAATCACTT ATCATCGTGG AAGACGATCC AAAATTGCAG 
GCTATGCTAA GCGAATACTT TGAAGGACAA GGCTTCGAGG TTAGCTGCAT AGACAATGGA
ACGGACGCTC CGGATGCGAT TCTTGAAAGC CAGCCAGATC TCGTTCTTTT AGATTTGATG
TTGCCGGGGC AAGATGGATT GAGCGTTTGC CGCCAGATCC GCGAATGCTA TAAAGGCAAA
GTGCTGATGC TTACTGCCAG TGATGATGAT TTTGACCATG TTGCTGCGCT TGAAATCGGT
GCCGATGATT TCGTTACCAA ACCGATTAAA CCTCGCGTGT TACTCGCTCG CATTCGAATG
CTATTACGCC GTAAAGAAGC ATCTGCAACA GATTCAGACA CGTGTTTAGA AGTTGGCGTC
CTGTGCCTTA ATCGCCTGCG TAAAACATGC GCTCTAAACC AAGAACCCAT TCCTCTCACC
GACGGTGAAT TTGATCTCCT TTGGGTACTC GCAAACCATC CTGAACAAAC CCTTTCTCGC
GAGTGGCTCA CCAAAAAATT ACGTGGCATC GAATACGACG GCACCGACCG AACTATTGAT
AACCGTGTCG TAACGCTGCG TAAAAAGTTA GGCGACAGCA CCACACCACC ACAGAAAATC
ATTACTGTGC GCGGTAAAGG TTACTTGTTT ATGCCTGATG CTTGGAACGC GTAA
 
Protein sequence
MNVQDIKQSL IIVEDDPKLQ AMLSEYFEGQ GFEVSCIDNG TDAPDAILES QPDLVLLDLM 
LPGQDGLSVC RQIRECYKGK VLMLTASDDD FDHVAALEIG ADDFVTKPIK PRVLLARIRM
LLRRKEASAT DSDTCLEVGV LCLNRLRKTC ALNQEPIPLT DGEFDLLWVL ANHPEQTLSR
EWLTKKLRGI EYDGTDRTID NRVVTLRKKL GDSTTPPQKI ITVRGKGYLF MPDAWNA