Gene VIBHAR_05241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05241 
Symbol 
ID5556994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp492946 
End bp493815 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content49% 
IMG OID640909718 
ProductABC-type hemin transport system periplasmic component 
Protein accessionYP_001447374 
Protein GI156976468 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4558] ABC-type hemin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA CACTTTCGCC CGTTCGTACC GCATTGACTG CAGCCATTAC TATGCTTGCC 
AGTGCGAGTC TGTTTGCCAA CGAAGCCCCA TCATCTGAGC GTGTTGTCAG TGCAGGCAGT 
GCAGTGACTG AACTGCTGAT TGCTCTTGAT GCAAAAGACA GCCTTGTTGC CGTTGACGTA 
ACAAGCCAAC TACCGGAGGG AATGGCGCTA CCAAAAGTTG GTTATCACCG CCGTCTATCT 
GCTGAAGGTC TACTGGGATT AAGCCCAACG AAATTGATTG GTTCAGATGA AATGGGGCCA 
AATACCACGC TCGACCAATT GAAATCTGCG GGTGTTGATG TCGAGGTCGT CAACACAGAA 
GCAAACGTGG AAGGTTTGGT TGACCGTATT GACCAAATTG CGACCATCAT GCATCGTGAA 
ACTCAAGCGA CAGCACTAAA AACGGAAGTT GAAGCGCAAG TGAAAGCACT TGAAGGCAAC 
CAACCAGCGA AAGCTGACAA AAAGAAAGTA CTTTTCCTAC TGATTCACGA AGGTCGCCCA 
GCAAACGTCG CGGGATCTGA CACTACACCT GATGCAATCA TTCAATTAGC GGGTGGTGAA 
AACCCAGCAG CGAGTAAGCT TTCTTCATAC AAACCGCTAT CTACAGAAGC AATGGTTGAG 
ATGCAGCCAG ACGTGATTCT TGTAAGTGGC CGTAGCTACC AAACCATGGG TGGTGCAGAT 
GCCATTTTGA AAGCGATGCC TCTGCTTGCT GCAACGCCTG CTGGCATAAA CAAAAAGTTC 
GTGACAATCG ATGGTCATGC GCTGGTTGGC GGCTTAGGGC TTAAAAGCCT GTCTGAAGCG 
AAGCGTTTGA ATGAACTGCT TTACCCGTAG
 
Protein sequence
MNKTLSPVRT ALTAAITMLA SASLFANEAP SSERVVSAGS AVTELLIALD AKDSLVAVDV 
TSQLPEGMAL PKVGYHRRLS AEGLLGLSPT KLIGSDEMGP NTTLDQLKSA GVDVEVVNTE 
ANVEGLVDRI DQIATIMHRE TQATALKTEV EAQVKALEGN QPAKADKKKV LFLLIHEGRP 
ANVAGSDTTP DAIIQLAGGE NPAASKLSSY KPLSTEAMVE MQPDVILVSG RSYQTMGGAD 
AILKAMPLLA ATPAGINKKF VTIDGHALVG GLGLKSLSEA KRLNELLYP