Gene VIBHAR_05223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05223 
Symbol 
ID5557255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp476941 
End bp477858 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content47% 
IMG OID640909700 
Producthypothetical protein 
Protein accessionYP_001447356 
Protein GI156976450 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTATT TGCTTCCGTT TTTTACTGTC ATGATTTGGG GTGGAAATTC CATCGTAAAT 
AAAATGGCAG CAAGTGCCAT CGAACCAAGT GCCATGAGCT TCTATCGTTG GTTTGTCGCT 
ATGGTGCTTC TGACGCCATT TTGCTTACCA GCGGTTATCA AACAGCGCCA TGTGATTCGC 
CCATACTTGG CTAAGTTAGC GTTCCTTGCG CTACTGGGCA TGGTACTAAA CCAATCACTC 
GGCTATTACG CGGGTCTTAC GACTACCGCT TCTAACATGG CACTGATTAC CTCTCTCGTC 
CCATTGATCA GTGTTTTCTT GAGTGTGCCT TTATTGGGTA AGTCGATTTC CATGCTGAGC 
GTGGCAGGTG GCGTGATTTC ATTAGGCGGT TTGGCGTTTA TGCTGGGTCA CGGTGACATA 
ACCTACTTCC TACATCAAGA CATGACGCAA GGTGACAGTC TGATGCTGTT AGCTGCCCTT 
TGTTACGCGA TTTACTGTGT GCTACTAAAA CGCTGGAAAA TGCCTTTCAG CAGCATGACC 
TTGGTCTATA TGCAGGGTTT TTTCTCATTG GTTATGCTTG CGCCATTGTG GCTAAGCAGC 
GATCAACTTC TACCAAGCCA AAGCGCATTA CCTTTAATTG CTTACGCTGG TATTGCCGCG 
TCTATCTTTG CTCCATTGAT GTGGGTAAAA GCGATTGAGT TGATTGGTGC AGACTCAAGT 
GCCATGTTCA TGAACCTGAT GCCTGTGGTT TCGGTAGCCC TCGCCTCAAC CATGCTCGGC 
GAAGAAGTTC ATGTTTACCA CATCATTGGC GGCATGCTGG TTATCTCTGG CGTTATCTTG 
TCGCAAATAA GATCCGCAAG AAGGTTCAAT CACCGAGCCC GGAGCTGCCA CCTGCGACAT 
CTTAATTCAA TCTCATAA
 
Protein sequence
MVYLLPFFTV MIWGGNSIVN KMAASAIEPS AMSFYRWFVA MVLLTPFCLP AVIKQRHVIR 
PYLAKLAFLA LLGMVLNQSL GYYAGLTTTA SNMALITSLV PLISVFLSVP LLGKSISMLS 
VAGGVISLGG LAFMLGHGDI TYFLHQDMTQ GDSLMLLAAL CYAIYCVLLK RWKMPFSSMT 
LVYMQGFFSL VMLAPLWLSS DQLLPSQSAL PLIAYAGIAA SIFAPLMWVK AIELIGADSS 
AMFMNLMPVV SVALASTMLG EEVHVYHIIG GMLVISGVIL SQIRSARRFN HRARSCHLRH 
LNSIS