Gene VIBHAR_05205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05205 
Symbol 
ID5557410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp461355 
End bp461888 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content43% 
IMG OID640909682 
Producthypothetical protein 
Protein accessionYP_001447338 
Protein GI156976432 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAC TAGCAACGTT ATTTAGCTTA GTACTTGTGC TTCTTAGCAC ACCTTCTTTT 
GCCAGTGCCA ATGAGCAAGA TTACTTACTC GATACTGGTG ATACCATCTC GGTTCAAGTC 
TACGGTGAGG AAGATCTTTC CATAAAGAAC ATCCTGATCA CTTCAGACGG CTATTTTGAT 
TATCCTTACT TAGGGCGAAT TAAAGCCATC AATAAGACCC CAAAACAGCT CAAGTATGAG 
ATTGAAACAG GACTGAAAGG TGACTACCTA ATCAATCCTA AAGTAATGGT GGCAATCAAT 
AGCTTCCGCC TTTTCTACGT AAATGGTGAA GTCCGAAAGC CTGGTGGATT CGAATACCAG 
CCGGGATTGA CGATTGAAAA AGCCATCGCG CTAGCTGGAG GCTTAACGGA TCGAGCGTCC 
CGCAAGAGCA TTAATCTTAC TCAACACGCA ACAGGTAATA CGGTTGAAAG CGTCAGTATG 
CAACGCTCTG TAGAACCTGG CGACATTGTA TTTATCGATC AGAGCTTCTT CTAA
 
Protein sequence
MNLLATLFSL VLVLLSTPSF ASANEQDYLL DTGDTISVQV YGEEDLSIKN ILITSDGYFD 
YPYLGRIKAI NKTPKQLKYE IETGLKGDYL INPKVMVAIN SFRLFYVNGE VRKPGGFEYQ 
PGLTIEKAIA LAGGLTDRAS RKSINLTQHA TGNTVESVSM QRSVEPGDIV FIDQSFF