| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05184 |
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| Symbol | |
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| ID | 5557352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 440061 |
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| End bp | 441968 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640909661 |
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| Product | PTS system fructose-specific IIABC component |
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| Protein accession | YP_001447317 |
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| Protein GI | 156976411 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component
[COG1445] Phosphotransferase system fructose-specific component IIB
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACCA AACTAATAAA TGAAGACTTG ATTAAGCTTG ATCTTCAAGC GACTTCAAAA
GAAGACGTAT TTAAAGAACT GGTTGCAGTT CTACACGCCC AAGGTCGTAT TTCAGACCAA
GAGCAATTTC TTGCAGATAT AAAAGCACGT GAAGAATTAG GTAATACCGG ATTTGAAGAT
GGCGTAGCTA TCCCACACGC AAAAAGTGCA GCAGTCATCG AACCAGCGGT TGTGATCGGC
GTAAGCAAAT CAGGTATCGA ATACGGCGCG GAAGACGGTT TGCCTTCAAA ACTGTTCTTC
ATGATCGCTT CTCCAGACGG TGGCGATAAC CACCACATCG AAGTACTTGC AGAGCTGTCT
TCAAAATTAA TTGAAGATGG TTTCATTGAT GCGTTTTTAG GTGCAACAAA CAGCCAAGAC
GCACTGGCAC TCGTGCTTGC TAAAGAAGAG CCACAACCAG TGGCAGACGC TCCAACAAAC
CAAGGCTTCA TCATTGGTGT TACCGGTTGT CCTGCAGGCG TTGCACACAC TTACCTAGCG
GCAGAAGCGC TTGAGAAAGG TGCAGCAGCG ATGGGGTACG AAATCAAGGT TGAAACGAAT
GGTTCAATCG GTGTGAAAAA CAGCCCAACC GCAGAAGAAA TCGAACGTGC AGACGCAATC
ATTGTGGCAT GTGACAAACA AGTCAACATG AACCGCTTTG CGGGCAAACG CGTGGTTAAA
ACTAACGTAA AAGCCCCTAT CCGCGATGCT CAAGGTCTGA TTAACGAAGC GTTAAGCGCT
CCAGAATACC AAGCAGAAGC AAGCAGCAAT GCGCAAACTT CTGTTGCAAA CAAGGCCTCT
CAGGCTCGCT CTGACCTATA CCGCTACTTG ATGAACGGCG TATCACACAT GATCCCATTC
GTTGTAACGG GTGGTCTGTT GATTGCACTT GCTCTTGCAG TTGGTGGGCA GCCAAGTGAA
GCCGGTATGG CAATTCCTGA AGGCAGCATG TGGAACCAAA TCCTCAACGT AGGTGTGGTT
GCCTTTACGC TGATGATTCC AATCCTAGCC GGTTACATTG CCTACGCGAT TGCTGACCGC
CCTGCTCTAG CTCCTGGTTT GATCGGTGGT TGGATTGCAA ACAACGGTTC TTTCTACGGC
GCAGACGCAG GTACAGGCTT TATCGGTGCC ATCATCGCTG GTCTGCTTGT GGGTTACTTC
GTGAAGTGGA TTACGTCGAT TAACTACCAC AAATTCATTC AACCTTTGGT GCCAATCATG
ATTGCGCCAA TCACAGGTTC GCTATTCATC GCTGGTCTTT TCATCTTCGT TATCGGCGCG
CCAATCGCAA GCCTAATGGA CGGTCTGACT GCGCTACTAA CAAGCATGAG TACAGGTAAC
GTCGTTCTAC TAGGCATCGT ACTTGGTGGT ATGGCTGGCT TCGATATGGG TGGTCCATTC
AACAAGGTCG CGTTCCTATT CTCTGTAGGC ATGATTGCGA GTGGTCAAAC TCAATTTATG
GGTGCGATGG CGTGTGCAAT CCCTGTTGCA CCTCTAGGCA TGGCACTGGC AACGGCACTG
GGTCGTAAGT TCGACCTGTT CGAAGAATCA GAAACCGAAG CGGGTAAAGC AGCAGGCGCA
ATGGGTCTAG TTGGTATCTC TGAAGGTGCG ATTCCGTTCG CAGCGCAAGA TCCAATGTCA
GTGATTCCAG CAAACGTACT TGGCTCAATG GTAGCGGCAG TAATGGCGTT CTCATTCGGC
ATTACCAACA GTGTTGCTCA CGGCGGTCCA GTTGTCGCTC TACTTGGCGC GATGAACCAC
CCAGTACTTG CTCTGATTTG TATGGCAGCT GGCGCAGTGG TTACCGCAGT AACGTGTGTA
ACTCTGAAGA AAGTTCGCAA AGCAAAAATG ATGCAAGCAG CCGCTTAA
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| Protein sequence | MITKLINEDL IKLDLQATSK EDVFKELVAV LHAQGRISDQ EQFLADIKAR EELGNTGFED
GVAIPHAKSA AVIEPAVVIG VSKSGIEYGA EDGLPSKLFF MIASPDGGDN HHIEVLAELS
SKLIEDGFID AFLGATNSQD ALALVLAKEE PQPVADAPTN QGFIIGVTGC PAGVAHTYLA
AEALEKGAAA MGYEIKVETN GSIGVKNSPT AEEIERADAI IVACDKQVNM NRFAGKRVVK
TNVKAPIRDA QGLINEALSA PEYQAEASSN AQTSVANKAS QARSDLYRYL MNGVSHMIPF
VVTGGLLIAL ALAVGGQPSE AGMAIPEGSM WNQILNVGVV AFTLMIPILA GYIAYAIADR
PALAPGLIGG WIANNGSFYG ADAGTGFIGA IIAGLLVGYF VKWITSINYH KFIQPLVPIM
IAPITGSLFI AGLFIFVIGA PIASLMDGLT ALLTSMSTGN VVLLGIVLGG MAGFDMGGPF
NKVAFLFSVG MIASGQTQFM GAMACAIPVA PLGMALATAL GRKFDLFEES ETEAGKAAGA
MGLVGISEGA IPFAAQDPMS VIPANVLGSM VAAVMAFSFG ITNSVAHGGP VVALLGAMNH
PVLALICMAA GAVVTAVTCV TLKKVRKAKM MQAAA
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