Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05096 |
Symbol | |
ID | 5558640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 332889 |
End bp | 335249 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909573 |
Product | ATP-dependent protease |
Protein accession | YP_001447229 |
Protein GI | 156976323 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTAC AAAGATTGGA ACCTAAACAG CTGTATTCTG TAGCTGAGTT AGAGAATATG CCATGTAAGT CGACCAAGGA ATTACCTCCG ATTGACGAGA TTGTTGGGCA AGAACGCGCA CAAAAAGCGG TTGAGTTCGC TATGTCAATC AAGGAGAAAG GGTACAACAT CTACGCCATT GGTCAGAATG GTCTGGGCAA GCGCACCATG ATTTTGCGCT ACTTAAACCG CCATCAGCAT GATGATGCGG CTCTGTTTGA TTGGTGTTAT GTCGCGAACT TTGAAGACAC GCGCACACCA AAAGTACTGA AACTGCCTTG CGGTATCGGT AACAAGCTTA AAGTCGATAT CGAAAAACTG ATGGGCAAGC TACTGAATGC ACTGCCTCTC GCTTTCGATA ACGAGATGTA CTACAGCCGT GCCGATCGCC TAAAAAACCA ATTGGCGAAC AAGCAACAGT CAGAATTGGA TACCATCAGT AAAGAAGCCA AAGAGAAGGG CATTAGCCTA ACGATCACTG CGCAAGGTGA TTATCAATTT GTGGCTATGA ATGGTGAAGA ACTGCATACC GAAGAGTCTT TCGATGAGCT AAGTAAGAAA GAGCAGGAAT ACTTCGGCAG TAGCATTGAT GAGCTGGAAG TGAGCTTACG TAACATGGTA CGTGAGTTAA CCGAGTGGGA AGACTCGTTC AGTGAGAAGA TCAAAAAGCT TAACGATGAT GTGACGTTGG ATGTGATCAC TCACTTCATC AAGCAGTTGA AAGTGGATTA CGCTGAGTAC CCAGAAATCA AAACTTACCT AACCGATCTA CAAAAAGACA TTGTTGAAAA CGCTGAGATC TTCTTAGAGC AGAGTGGTGA GCAAGGTGAG ATTGCGACCG CTTCTCTGGA TAAGAAATTG CCACGTCGTT ACAAAGTCAA TGTGCTGGTG AATCGCAAAA ACAGTGAGTT CCCTATCGTG GTAGAAGAGA ATCCGAACTA CCACTCGCTG TTTGGTTCGA TTGAAACCGC AACCTTCAAA GGTACGGTAT TCACCGATTT CTCTTTGATT CGAGCGGGTA GCTTGCACAA GGCGAACGGT GGTGTGCTAT TGATGGATGC ACAAAAGGTA CTAGAACAGC CTTACGTGTG GGACGGATTG AAGCGTGTTT TACGCTCTCG TCAGTTGAGC TTCACGTCAC TAGAGAAAGA AGTAACGCTG ACTGGTGCCG TTTCGCTTGA CCCTGAACCG ATTCCATTAG ATATCAAGAT CATCTTGTTT GGTGATTACC GTACATACCA ATTGCTGCAA CACTACGATC CGGAGTTTGG TGAGCTGTTC CGAGTTACGG CGGATTTCGA AGATGAAATG AAACGTACTC CGGATTCAGA GCTGCAATAC GCACGCTTTA TCTCTAGTGT GGTGAACGAC AACAACATGC TGCACTGCGA TAAAAAAGCC ATTGCGCGCA TTATCGAGTA CAGCTCACGC TTGTCTGGTG ACCAAACCAA GCTTTCGTTG CATTCTGCCA ACATCGCTAA CCTATTACGT GAGTCTAACT ACGTCGCTCG CCAAGCGAAC TCCAACATGA TCCGTATCGG ACACGTGGAA GAGGCTTTGA GCAACCAAGA AATACGAGTT AGTCGTTTGC AAGATAGCGT GATGGAAACA TTCGTCAATG GCACAACCTT GATTCACACT GATGGTTCTG CTGTTGGCCA AGTCAATGCT CTCTCGGTAC TGAGCACCAG TGATCACATG TTTGGTGCGC CAAACCGAAT TACTGCGACG ACGTGTTACG GCGATGGAGA CGTGATTGAT ATCGAACGAA GTGTCGACCT TGGCGGCAGC ATCCACTCTA AAGGTGTGAT GATTCTGTCT GCTTACTTGT CGTCTGTGTT CGGTAAGACT GCACGTGTGC CACTAACCAC CACAATTACC TTTGAGCAAT CGTACGGTGG TGTTGATGGC GATAGCGCAA GTATGGCTGA GTTCTGTGCT GTGGTATCTG CGTTCTCGAA ACAGCCAAAC CGTCAGGATA TTGCAATCAC AGGTTCGATG AACCAATTCG GTGAAGCGCA ACCTATTGGC GGTGTGAACG AGAAGATCGA AGGCTTCTAC GATGTGTGTG AAATCAAAGG GCGTCATGCG GGGCAAGGGG TGATCATCCC ACGTTCCAAC GTGCATAATC TAATGCTTCG TCCTGACATT GTGAAAGCAG TAGAGAAGGG GGATTTCCAC ATCTGGGCAA TCGATCACGT CACCGAGGCT GTTGAGCTAT TTACCGGTAA AGTGGCGGGC GAAGCAACAG ACGAAGGAAC TTACCCAATC GACACCATTT TTGGGTTGGC ACAAGCTAAG TTAAATGCGC TGAGAAAATA A
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Protein sequence | MAVQRLEPKQ LYSVAELENM PCKSTKELPP IDEIVGQERA QKAVEFAMSI KEKGYNIYAI GQNGLGKRTM ILRYLNRHQH DDAALFDWCY VANFEDTRTP KVLKLPCGIG NKLKVDIEKL MGKLLNALPL AFDNEMYYSR ADRLKNQLAN KQQSELDTIS KEAKEKGISL TITAQGDYQF VAMNGEELHT EESFDELSKK EQEYFGSSID ELEVSLRNMV RELTEWEDSF SEKIKKLNDD VTLDVITHFI KQLKVDYAEY PEIKTYLTDL QKDIVENAEI FLEQSGEQGE IATASLDKKL PRRYKVNVLV NRKNSEFPIV VEENPNYHSL FGSIETATFK GTVFTDFSLI RAGSLHKANG GVLLMDAQKV LEQPYVWDGL KRVLRSRQLS FTSLEKEVTL TGAVSLDPEP IPLDIKIILF GDYRTYQLLQ HYDPEFGELF RVTADFEDEM KRTPDSELQY ARFISSVVND NNMLHCDKKA IARIIEYSSR LSGDQTKLSL HSANIANLLR ESNYVARQAN SNMIRIGHVE EALSNQEIRV SRLQDSVMET FVNGTTLIHT DGSAVGQVNA LSVLSTSDHM FGAPNRITAT TCYGDGDVID IERSVDLGGS IHSKGVMILS AYLSSVFGKT ARVPLTTTIT FEQSYGGVDG DSASMAEFCA VVSAFSKQPN RQDIAITGSM NQFGEAQPIG GVNEKIEGFY DVCEIKGRHA GQGVIIPRSN VHNLMLRPDI VKAVEKGDFH IWAIDHVTEA VELFTGKVAG EATDEGTYPI DTIFGLAQAK LNALRK
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