Gene VIBHAR_05000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05000 
Symbol 
ID5558792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp256392 
End bp257585 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content48% 
IMG OID640909478 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001447134 
Protein GI156976228 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTG CATTTTACCA ACAGATTGAA CAGCAAATTG AAGAAGTGAA GGCGGAAGGC 
CTTTACAAAG CAGAGCGTAT CATCACGTCT CAACAGCAAG CAGCGGTTAA AATCTCTACT 
GGTGAAGAAG TACTAAACTT CTGTGCGAAC AACTACCTTG GTCTTGCTAA CCACCCAGCA 
CTTATCGAAG CGGGTAAAGC GGGTATGGAC GAGCACGGTT TTGGTATGGC TTCAGTACGT 
TTCATCTGTG GTACTCAAGA CATTCATAAA GAGCTTGAGC AGAAGCTTTC TAAGTTCCTA 
GGTAAAGAAG ACACGATTCT TTACACATCA TGTTTCGACG CAAACGCGGG CCTATTTGAA 
ACGATTCTAG GTAAAGAAGA CGCAATCATC TCTGACGCAC TAAACCACGC GTCAATCATC 
GACGGTGTTC GTCTATGTAA AGCGATGCGT TTCCGTTACT CAAACAACAA CATGGAAGAG 
CTAGAGCAAC AACTGATTGC TGCGAAAGAA GCTGGCGCTC GCCACATTCT TATCGTAACG 
GACGGCGTGT TCTCAATGGA CGGCGTAGTA GCAAACCTTC CAGCTATCTG TGACCTAGCA 
GAGAAGTACG GCGCATTGAC TATGGTTGAT GATTCTCACG CTGTTGGCTT CATGGGTAAA 
ACAGGTGCTG GTACGCACGA GCACCACAAC GTTGTTGACC GTATCGACAT CATCACTGGT 
ACGCTAGGTA AAGCAATGGG CGGCGCTTCA GGCGGTTACA CATCTGGTAA AGCAGAAGTG 
ATTGACTGGC TACGTCAGCG TTCTCGTCCA TACCTATTCT CTAACTCTGT TGCACCAGCA 
ATCGTAAGCG CTTCTATCCG CGTTCTAGAC CTACTAGAAG AGAGCGGTGA CCTACGTGAC 
CGTCTATGGG AAAACGCAGC ACACTTCCGT ACTCGTATGG AAGACGCTGG TTTCACAATG 
GGTGGTGCTG ACCACGCAAT CATTCCAATC ATGCTTGGTG ACGCAAAAGT AGCAGCAGAA 
TTCGCAGAGC GCGCTCTAGA GAAAGGCATC TACGTAATCG GCTTCTCATT CCCTGTTGTA 
CCAAAAGGTC AAGCGCGTAT CCGTACTCAA ATGTCTGCAG CGCACTCTCG TGAGCAACTA 
GACCGTGCAA TCGACGCGTT CATCCAAGTT GGTAAGGACA TGGGCATCAT CTAA
 
Protein sequence
MSSAFYQQIE QQIEEVKAEG LYKAERIITS QQQAAVKIST GEEVLNFCAN NYLGLANHPA 
LIEAGKAGMD EHGFGMASVR FICGTQDIHK ELEQKLSKFL GKEDTILYTS CFDANAGLFE 
TILGKEDAII SDALNHASII DGVRLCKAMR FRYSNNNMEE LEQQLIAAKE AGARHILIVT 
DGVFSMDGVV ANLPAICDLA EKYGALTMVD DSHAVGFMGK TGAGTHEHHN VVDRIDIITG 
TLGKAMGGAS GGYTSGKAEV IDWLRQRSRP YLFSNSVAPA IVSASIRVLD LLEESGDLRD 
RLWENAAHFR TRMEDAGFTM GGADHAIIPI MLGDAKVAAE FAERALEKGI YVIGFSFPVV 
PKGQARIRTQ MSAAHSREQL DRAIDAFIQV GKDMGII