| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04973 |
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| Symbol | fliF |
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| ID | 5558783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 228445 |
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| End bp | 230196 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640909452 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001447108 |
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| Protein GI | 156976202 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAC TTTCCACTCA AGTGGCCGGT AATTCTGCAA TGCATGCCGG TACAACTCAG
ACTCCTTCCT CAAATCGAGG GATGGATGAC GTAACCAATA AAATCAAGCA ATTGTGGTCG
AGCAGCCAGC GTAACCTCGT ATTATCCGCG GTGTTAGCGG CCATTGTTGC GGCCATCATC
GTGGTGGCGC TTTGGAGCTC TTCGCAAAGC TTCCGTCCGT TATACAGCCA ACAAGAGCGT
TTTGATATCG GCGAAATTGT GTCGGTATTA GAAAGCGAAG GCATTAGCTA CCGCATGCAA
GAGCAAAACG GCCAAGTATT GGTTCCAGAA GGTGAAGTTG CCCGCATCCG CATGCTGCTT
GCTTCGAAAG GGGTGAAAGC GAAATTGCCA ACGGGTCTGG ACTCATTAAA AGAAGACAGC
TCGCTAGGTA CCAGCCAGTT TATGGAAACG GCACGTTATC GTCACGGTTT AGAAGGTGAG
TTAGTGCGCA CTATCATGTC GCTAAATGCA GTAGCGAATG CTCGCGTCCA TCTTGCGATT
CCTCGCCAAA CCTTGTTTGT GCGCCAAAAC ACGGAAAACC CATCGGCTTC TGTGATGTTA
GAGCTTAAGC CGGGCGAAGA TCTTAAGCCT GAGCAGGTCG AAGCTATCAT CAACCTGGTG
GTTGGCAGCG TGACAGCAAT GAAGCCTGAA TTTGTCTCGG TCATTGACCA ATACGGTCGA
CTATTGAGTG CGGATGTGGC TTCTGCTGAA GCGGGCAAAG TGAACGCGAA ATATCTTGAA
TACCAAAAGA GCGTTGAGAA GCAAATCATC CAACGCGCGG CTGACATGCT AACGCCAATC
GTAGGGCCAA GTAACTTCCG CGTACAAGTT GCGGCGGATA TGAACTTTAG CCAAGTCGAA
GAGACACAAG AGATCCTCGA CAACGCACCA GTCGTTCGTA ATGAACACAC TATTCAAAAC
AACTCCGTTG ACCAAATCGC GTTGGGCATT CCTGGCTCGT TAAGTAACCA ACCTCCCGTA
ACTGGTGAAA CGCCAACCAA CGATAGCCAG AACACCAATG CACGTTCAGA AGTGAATCGC
CAATATGCGG TAGGCAGCAG TGTGCGTCGA ACTCAGTACC AACAAGGTCA AGTTGAAAAG
CTCAGCGTGT CAGTTCTGCT TAACTCGCAA GCCGCACCAG ATGGTGTCGC GTGGAGTGAA
GCGGATAAAT CGCAAATCTC AACCATGATC ATGGACGCTG TGGGTATCTC GAATGCGCGT
GGCGACAGCT TGAGCTTGAT GAGCTTTAAC TTCACCCCAA TCGAGATCGA CGCGCCGCCA
GCATTGCCTT GGTGGCAAGA CCCAACGGTG CAGCAACCAT TGCGTTACGT GATTGGCGGT
GTGTTAGGTC TAGCGATGAT CTTCTTTGTG CTGCGCCCGT TGATCATGCA TTTAACGGGA
GCGGATAAGC CTGCTCAAGA ACTTGAATTT GCTGAGCCAC AAGAAGAACC GCAATACGAT
AACCTCCAGA CTCGTGAAGA GCGTGAGCGC GAAGAGGTGC TCAACCGCAA ACTGTCGGAG
AAAGGCATTG CCGTATCGTC CGGCTTGGAT GTGAACAGCG ACATGCTGCC GCCAGCGGGT
TCTCCACTAG AGATTCAATT GAAACACCTA CAGCTTATTG CTAACGAAGA GCCAGAGCGT
GTAGCCGAAA TTCTGAAACA ATGGGTAAAC ATCAATGAAC ACAGCACAGT CGACGTCAAA
GCAGACGCAT AG
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| Protein sequence | MSELSTQVAG NSAMHAGTTQ TPSSNRGMDD VTNKIKQLWS SSQRNLVLSA VLAAIVAAII
VVALWSSSQS FRPLYSQQER FDIGEIVSVL ESEGISYRMQ EQNGQVLVPE GEVARIRMLL
ASKGVKAKLP TGLDSLKEDS SLGTSQFMET ARYRHGLEGE LVRTIMSLNA VANARVHLAI
PRQTLFVRQN TENPSASVML ELKPGEDLKP EQVEAIINLV VGSVTAMKPE FVSVIDQYGR
LLSADVASAE AGKVNAKYLE YQKSVEKQII QRAADMLTPI VGPSNFRVQV AADMNFSQVE
ETQEILDNAP VVRNEHTIQN NSVDQIALGI PGSLSNQPPV TGETPTNDSQ NTNARSEVNR
QYAVGSSVRR TQYQQGQVEK LSVSVLLNSQ AAPDGVAWSE ADKSQISTMI MDAVGISNAR
GDSLSLMSFN FTPIEIDAPP ALPWWQDPTV QQPLRYVIGG VLGLAMIFFV LRPLIMHLTG
ADKPAQELEF AEPQEEPQYD NLQTREERER EEVLNRKLSE KGIAVSSGLD VNSDMLPPAG
SPLEIQLKHL QLIANEEPER VAEILKQWVN INEHSTVDVK ADA
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