Gene VIBHAR_04971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04971 
Symbol 
ID5558781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp226736 
End bp228070 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content51% 
IMG OID640909450 
Productacetoacetate metabolism regulatory protein AtoC 
Protein accessionYP_001447106 
Protein GI156976200 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGA AAATGGATAT TTTGTTGGTT GAGCCAAATG AACACCTCGC TCAACCAGTG 
CTGGATGTAC TTGGGAATGC TGGTTATTCC GCAAGACACA GTCGCACTGG TCGCAGCGCG
CTATTGGAAG AGCGAGCTTG CATTACGTTG GTCAGCTCAA ACTTACCGGA CATGTGTGTG
CGTGAGTTTG TTGCGTGTCA TCAAAAGCAG CGTAGTGCTG GTGTGGTGAT TGCGATTGTT
GATCAAGAGC AGGGCATTTT GGCGGCGGAA ACAATGAAGT CTGGGGCGAC GGATTACTTA
CTTCGTCCCT TTGAAACGAA TCAATTGCTG AACTTACTCA AGCGAGTGGA AGCCTTGGGC
AAACCACTGG CCAACATCGT GGCTGAATCA TGGCGCAGTA AACAAGTGCT TCAACTCGCG
CACCGAGCTG CCTGCACCAA TGCCAGCGTG CTTATTACTG GTGAATCGGG TACGGGTAAG
GAAGTGCTGG CACGTTACGT TCATGAGCAA TCTCCTCGTG ATGACGGTCC GTTTGTCGCA
GTGAACTGTG CTGCGATTCC AGAATCTATG TTGGAAGCAG TGCTGTTTGG CCACGTGAAA
GGGGCATTTA CTGGTGCCAC CAATTCGCAA AGCGGTAAGT TTGAAGAGGC CAATGGTGGC
ACGATTCTAC TGGATGAAAT TGGTGAGATG TCACCAGCGG TGCAGGCGAA GTTATTACGT
GTGCTTCAAG AGCGAGAAGT GGAACGTGTT GGCAGCCATA AAGCGATTCA GTTGGATATC
CGAGTGATCG CTGCAACCAA CAAAGACCTG CGCGAAGAAG TGCAAAAAGG CACATTCCGT
GAAGATCTTT ACTACCGTTT GGATGTGCTG CCATTGCATT GGCCACCCCT GCGAGAGCGC
AAAGAAGACA TTTTGCCGAT CAGCCAGTTC TTTATTGGAA AATACCAAGA CGGCAGCCGC
TGCCATCTGT CTCAAGATGC TATTTCTGCC CTGAGCCAAT ATCACTGGCC GGGCAATATT
CGCGAACTCG AAAACGTCAT TCAACGTGCG CTTGTCATGC GTCATGGGGA TTACATCACC
GCGCATGATC TGATGCTGCC AATCGAATTG CTGACGCCAG TGCCTTCCGC TGAACCGGTT
TCAAGCTTTG GCCACGTTGA GGCGAAGAAG CAAGCTGAGT TCCAGTTTAT TCTCGACAAA
TTACGTCAGT TTGGTGGAAA CCGAACCAAA ACGGCCAACG CTTTGGGAGT GTCTACTCGA
GCGTTACGTT ACAAGCTCGC CGCCATGCGC GAACACGGTA TTGATTTACA GTCGGCGCTT
GGCTCGGCTG CCTAA
 
Protein sequence
MMTKMDILLV EPNEHLAQPV LDVLGNAGYS ARHSRTGRSA LLEERACITL VSSNLPDMCV 
REFVACHQKQ RSAGVVIAIV DQEQGILAAE TMKSGATDYL LRPFETNQLL NLLKRVEALG
KPLANIVAES WRSKQVLQLA HRAACTNASV LITGESGTGK EVLARYVHEQ SPRDDGPFVA
VNCAAIPESM LEAVLFGHVK GAFTGATNSQ SGKFEEANGG TILLDEIGEM SPAVQAKLLR
VLQEREVERV GSHKAIQLDI RVIAATNKDL REEVQKGTFR EDLYYRLDVL PLHWPPLRER
KEDILPISQF FIGKYQDGSR CHLSQDAISA LSQYHWPGNI RELENVIQRA LVMRHGDYIT
AHDLMLPIEL LTPVPSAEPV SSFGHVEAKK QAEFQFILDK LRQFGGNRTK TANALGVSTR
ALRYKLAAMR EHGIDLQSAL GSAA