Gene VIBHAR_04968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04968 
Symbol 
ID5558041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp224114 
End bp224482 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content48% 
IMG OID640909447 
Productflagellar motor switch/type III secretory pathway protein 
Protein accessionYP_001447103 
Protein GI156976197 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG CGCAAGACAA CCAAGCATTC GACGCCGATG ATTTAAACTT TGACGATTTT 
CAATTGGAAG ATTTTGAAAC TGAACAGGCA TTCGCTCCCG AGCCTGTTGC AGAGCGCGAC 
CTAAGTTTCT TCAAAAGCAT CCCAGTAACG GTCACGCTAG AAGTCGCGAG CAAAGAGATT 
CCTTTGGGCG ACCTGATGAA AGCCGGTGAA GGCACAGTGA TTGAACTGGA CAAGCTCAAT 
GGCGAACCAC TTGATGTGAA AGTAAACGGC TCTCTGATGG GGCAGGCAGA AGTCGTGGTT 
ATTAACGATA AATATGGCTT GCGCCTAATT AATGTGCATG ACTCTGCGCT TAGCGGCGTA 
GGTCGATAA
 
Protein sequence
MSDAQDNQAF DADDLNFDDF QLEDFETEQA FAPEPVAERD LSFFKSIPVT VTLEVASKEI 
PLGDLMKAGE GTVIELDKLN GEPLDVKVNG SLMGQAEVVV INDKYGLRLI NVHDSALSGV 
GR