Gene VIBHAR_04953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04953 
Symbol 
ID5558243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp211493 
End bp212548 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content52% 
IMG OID640909432 
Productflagellar hook-length control protein 
Protein accessionYP_001447088 
Protein GI156976182 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTTA CCAACTCAAT ACCTGCGAGT TCACCTTCTC AATCGACAGC CGCTGGGAAG 
ATCTCTCACG CTCGTTCAGA GCAAGGCGTT TCACCAGCAA ATTCAGCCAC GGTCACTCAA
CAGGGCCAAA CCAACGCGCC TATCACCGTT GCCGGATTTC GCTTAAATAC GCAAGCCTCA
CCGGCGGAAG TGATGCGACC TGACGCCAGC TCACCAGAGC TCCACACAGA AGACACCTCT
GACGAAACGT TACTAGGTAA TGCTTCATCA GAGGTGAGTC TGGTCACCCA AGCGCAAGCT
CTCATGCAGG GAATCAGTAA GGCGGCCACT AAGCAAGGCG ATACCAACCA GCTTGCACAA
GTGTCGGCAA ATAACACATC GCAAAGTGCA AACATGGGCG CTCAAGCCAA CCCAATGCTT
ACAGCCCCCG CGCAAGAGAA CCAACGTGGT GTGCAAGCGA GCGCGGTAAA TTCACTTAAA
GTTTCTGCTT CTGATTTGCA AACGTTGCTG AATCAACCTG CTCATGGGCA GGCATTCGCA
GCCAACACGC AATCGCAGAC ACCAACCGCG CAACATCCAA ATCCAACCTC ACCGCTTGCG
GCAACTCAAG CTCAAGGTGC AGAGTGGGCG GCGGTTCGCG TGGATACCAG CTCTGGTAGA
TGGGGCGAGC AGATGATGCA AGTGCTGCAA GATCGCGTGA CATTACAAGC TCAGCAAAAC
CTACAAGAAG CCAAAATCCG TCTCGACCCA CCAGAGTTAG GCAAATTGGA TTTATTGGTA
CGCGTGGAAG GTGACCGCTT GAGCGTGCAG ATCAACGCCA ATACTGCCGC AACTCGTGAA
GCCTTAATGC AGGTATCTGA GCGCCTTCGC ACTGAGCTTC AAGAGCAAAA CTTTGTGCAT
GTAGATGTCA ACGTCGGTTC GGACCAAGGT CAGGAAAGAC AAGCACATGA TGGTGCTCAA
GAAGAAGCAA ATATCTTCGC CGCGCGTGAA ACCAACGCCT TTCAATCTAA TACAACAACA
AACTATTCAG AGCATTGGCT GAACACTCAA GCCTAA
 
Protein sequence
MMVTNSIPAS SPSQSTAAGK ISHARSEQGV SPANSATVTQ QGQTNAPITV AGFRLNTQAS 
PAEVMRPDAS SPELHTEDTS DETLLGNASS EVSLVTQAQA LMQGISKAAT KQGDTNQLAQ
VSANNTSQSA NMGAQANPML TAPAQENQRG VQASAVNSLK VSASDLQTLL NQPAHGQAFA
ANTQSQTPTA QHPNPTSPLA ATQAQGAEWA AVRVDTSSGR WGEQMMQVLQ DRVTLQAQQN
LQEAKIRLDP PELGKLDLLV RVEGDRLSVQ INANTAATRE ALMQVSERLR TELQEQNFVH
VDVNVGSDQG QERQAHDGAQ EEANIFAARE TNAFQSNTTT NYSEHWLNTQ A