Gene VIBHAR_04918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04918 
Symbol 
ID5558271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp181787 
End bp183160 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content49% 
IMG OID640909397 
Productflagellar hook-associated protein 
Protein accessionYP_001447053 
Protein GI156976147 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTG TTAATATCGC CCTTTCAGGC TTAAACGCGA ACCGTGTGGC GTTGGATGTG 
ACCGCGCAAA ACGTGGCAAA CATCATCACC CCTGGATACA GCCGACAACA AGCATTGATG
ACTTCTGTTG GTGACGGTAA GTACAACAAG CTCAGCCCTG GAATGGGTGT TGAAGTAACG
AGCATTCGCC GTGTCACAGA CCAATTCTTG GTGAAGCAAA CGTGGTCGAC CAACAGTTTA
GCGGCGTATT CGGCAGGTTA TACCACCGCC ATGAGCCAGA TTGAAAATAC GTTGGGTGCT
GATGGTTTTA GCGTTTCTGC GGGGTTAGAT TCCCTTAATG CTGCGCTGAA TGATGCGACA
GTAAAACCAG AATCAATCCC ATACCGTCAG CAAATCATTA ATGAATCGGA AGCGTTAGCA
CGCCGATTCA ATACGTTAAC CGAGTCGCTT CACAATCAGC ACAAGGACAT GAGTGATCAG
CGTAATGCCG CGTTGAGCCA TGCCAATAGC TTGATGGCGA ACATTGCTCA GGTAAACAAG
CAGATTGTCG AAATGCAAGG CACAGGTGGT AACCCAGCGC AGTTGATGGA CACTCGCGAT
GTGTTGATTG GTGAGCTTTC TCAAATCGTT GAAATCAAAA CTACCGACCA ACCAGACGGC
AGCATGCAAG TGACGCTCGC TTCTGGTCAG CCTTTGGTAA TGGGATCGGA TTATGGTCAG
CTGGCAGCGA AGCCAGACCC AAGCGATCCA TATCTTGCGG ATTTGAGTGT CGAATTCGCC
TCGCAAAGCT TTGTCATTGA CCACTCTGTA GGCGGCAAGT TGGGCGCGAT TAATGATTAT
CAAACCGAAG TGCTTAAGCC AAATCAAGTC GCTCTGGATG ACATGGCAAA AGCATTGGCG
GATGAATACA ACGCTGTGCT GGCAACAGGC CAAGATCTCA ACGGCAATCC GGGCAAACCA
TTGTTTAGCT ACGATCCAGC AAACCCCGCA GCAAGCCTCA CCATTACCGA TATCAGCGCG
GAAGAATTAG CGTTCTCCAG TGATGGCACC CCGGGTAATG CAGATGTGTT GAATGACCTG
ATTCAACTGA GCAATAAGCC AGTTTCAGTC ACTGGCTATG GCTCGCTGAG CTTAAACGAT
GCGTTCACCG CGATGGTTGG TGAAACGGCA ATCAAAGCAC GCCAAGCAGA AGCGGATTAT
GAAGCTAAAG CGGCAATGAA CAAACAAGCG CATGCCGCGC GCGACAACGT CAGTGCGGTG
AACAGCGATG AAGAAGCGGC GAATCTGATG ACATTTGCTA ACGCACACAA CGCCAACATG
AAAGTCATTA GCACCGCTAA CCAGCTTTTC GACTCTGTAT TGCAGTTATT CTAA
 
Protein sequence
MNLVNIALSG LNANRVALDV TAQNVANIIT PGYSRQQALM TSVGDGKYNK LSPGMGVEVT 
SIRRVTDQFL VKQTWSTNSL AAYSAGYTTA MSQIENTLGA DGFSVSAGLD SLNAALNDAT
VKPESIPYRQ QIINESEALA RRFNTLTESL HNQHKDMSDQ RNAALSHANS LMANIAQVNK
QIVEMQGTGG NPAQLMDTRD VLIGELSQIV EIKTTDQPDG SMQVTLASGQ PLVMGSDYGQ
LAAKPDPSDP YLADLSVEFA SQSFVIDHSV GGKLGAINDY QTEVLKPNQV ALDDMAKALA
DEYNAVLATG QDLNGNPGKP LFSYDPANPA ASLTITDISA EELAFSSDGT PGNADVLNDL
IQLSNKPVSV TGYGSLSLND AFTAMVGETA IKARQAEADY EAKAAMNKQA HAARDNVSAV
NSDEEAANLM TFANAHNANM KVISTANQLF DSVLQLF