Gene VIBHAR_04914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04914 
Symbol 
ID5558193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp178617 
End bp179402 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content51% 
IMG OID640909393 
Productflagellar basal body rod protein 
Protein accessionYP_001447049 
Protein GI156976143 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCAG CATTATGGGT AAGTAAAACG GGCATGGCAG CTCAAGATAC CAAAATGACT 
GCCATCTCTA ACAACCTAGC GAACGTTAAC ACGGTCGGCT TTAAACGTGA CCGCGTGGTG
TTTGAAGACT TGTTTTACAG CATTCAGCGT CAGCCGGGCG CGCAAGTCGA CCAAGTGAAT
GAACTGCCAA GCGGTGTTCA GCTTGGTTCT GGTGTTCGCG TAGTCGGTAC GCAGAAAGTC
TTCACCCAAG GCAACACACA AAATACCACT CAAGAGTTGG ATTTAGCGGT GATGGGGCAA
GGCTTCTTCC AAATCGAAAA CTCTGACGGT CAGATCATGT ACACGCGTAA TGGTCAGTTC
CACATCAACT CAGAGGGTTT GATGGTCAAC AGCCAAGGTT TGCCACTAGA GCCGCAAATT
CAAATCCCAG ACAACGCGAT TTCGTTCTCT GTGGGTGTGG ATGGCACGGT AACTACCACA
TCGGCTGACG ATCCAACGCC GCAGCAACTG GGTCAAATCA CGCTGGCGAA GTTCATCAAC
CCAGCCGGTC TAGAAGCCGT TGGCGGTAAC TTGTTCCGTG AGACAGAAGC AAGTGGTCCT
GCTGATGAGT TAATTGCGGG CGAAGACGGT GCTGGCAGCA TCAAACAGGG CGCTTTAGAA
GGTTCAAACG TGCAGGTAGT GGAAGAGATG GTCGACATGA TCACCACTCA ACGCGCGTAC
GAGATGAACG CCAAAGTGGT TTCTGCCGCA GACGACATGC TGAAGTTTGT CGCGCAGTCG
ATGTAA
 
Protein sequence
MHSALWVSKT GMAAQDTKMT AISNNLANVN TVGFKRDRVV FEDLFYSIQR QPGAQVDQVN 
ELPSGVQLGS GVRVVGTQKV FTQGNTQNTT QELDLAVMGQ GFFQIENSDG QIMYTRNGQF
HINSEGLMVN SQGLPLEPQI QIPDNAISFS VGVDGTVTTT SADDPTPQQL GQITLAKFIN
PAGLEAVGGN LFRETEASGP ADELIAGEDG AGSIKQGALE GSNVQVVEEM VDMITTQRAY
EMNAKVVSAA DDMLKFVAQS M