Gene VIBHAR_04912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04912 
SymbolflgE 
ID5558191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp176634 
End bp177833 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content51% 
IMG OID640909391 
Productflagellar hook protein FlgE 
Protein accessionYP_001447047 
Protein GI156976141 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTA ACATCGCACT TAGTGGTCTG GACGCGACCA ACACAGAGTT AAACACCATC 
AGCCACAACA TTGCCAATGC ATCAACGTAC GGCTTTAAAG GTGGCCGCAC AGAATTTGCC
GCGGTTTACA ACGGCATGCA ACCGGGCGGC GTAGAAGTGG CGTCGATTTC TCAGAACTTC
GATAAGAATG GTTCGGTGAC AGGCACAGGC CGTGCAATGG ACTTGGCGAT CAATGGCAGC
GGCTTCTTCG TGACGAAAGA TCACATGGGT CAGATGCTTT ACACTCGCGC GGGTGTGTTT
GGTACTGATA AGAACAACTT TGTGACTGCA AATAACGGTG CCAAGTTGCA AGGTTACAGC
GTAGACAACA ATGCGAACCT TCAAACTGGC TCTGTTGGTG ACATCAAAGT TTCTACGTCT
TCACTTAACG CAAAAGCGAC CGACAATCTG GACTTTGTGG CGAACTTCGA CGCAAGCGCA
ACGGCAGTTG ACCAAGCCAT TTACCCATTC GATTCTTCCG ATCCAAACTC ATTCAACTCT
TCTTATACCA CTAAGGTGTA CGACTCACTT GGCAACTCGC ACACAGTCAC TCAGTACTTC
ACGAAGACAT CAGATAACGA ATGGCAAGTG AACGTGGAAG TCGACGGTGC ACCAACGACG
CCAGCAACGG CTCAAACGGT TCAATTCAAT ACAGACGGCA CGCTAGCTTC TCCAACGGGT
TCTTTCAATG TTGCATTCCC AGCGGCGGGC GCAAACGCAA TGAGCATTGA TATCAGCTTG
AACGGCAGCA CTCAGTTTGG CGCTGCGTTT GGCGTGAGCA CTAACAACCC GAACGGTTAC
ACCTCAGGTG AGCTTGCGGG CGTTCGAGTG GAAGACAACG GCATGGTTTA CGCGACTTAC
ACTAATGGCC AGTCTCAGCT GCAAGGTCAG GTTGTGCTTG CGGATTTCGC TAACACGCAA
GGTCTATCGA AAGTGAGCGG CACGGCTTGG ACACAAAGCT TTAGCTCTGG CGCGCCAATC
ATGGGTGTTC CGGGTACAGG CACATTGGGT GACTTAACAC CGGGTGCGCT AGAAGGCTCT
AACGTTGACT TAACTAGTGA GCTGGTTGCG CTTATGACGG CGCAGCGTAA CTACCAAGCG
AACGCGAAAA CCATTTCGAC CAATGACAAG CTGACTCAAG CTCTGTTCAA CGCGGTGTAA
 
Protein sequence
MSFNIALSGL DATNTELNTI SHNIANASTY GFKGGRTEFA AVYNGMQPGG VEVASISQNF 
DKNGSVTGTG RAMDLAINGS GFFVTKDHMG QMLYTRAGVF GTDKNNFVTA NNGAKLQGYS
VDNNANLQTG SVGDIKVSTS SLNAKATDNL DFVANFDASA TAVDQAIYPF DSSDPNSFNS
SYTTKVYDSL GNSHTVTQYF TKTSDNEWQV NVEVDGAPTT PATAQTVQFN TDGTLASPTG
SFNVAFPAAG ANAMSIDISL NGSTQFGAAF GVSTNNPNGY TSGELAGVRV EDNGMVYATY
TNGQSQLQGQ VVLADFANTQ GLSKVSGTAW TQSFSSGAPI MGVPGTGTLG DLTPGALEGS
NVDLTSELVA LMTAQRNYQA NAKTISTNDK LTQALFNAV